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AT2G35530.1
Subcellular Consensus
(Prediction and Experimental)
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SUBAcon:
nucleus 1.000
ASURE: nucleus
What is SUBAcon?
Experimental Localisations and PPI
FP MS/MS PPI
  • PMID:28865150 (2017): extracellular region plant-type cell wall
SUBAcon links
AGI-AGI relationships
Coexpression PPI
Description (TAIR10) protein_coding : basic region/leucine zipper transcription factor 16
Curator
Summary (TAIR10)
Encodes a G group bZIP transcription factor family member that can bind cis elements with an ACGT core, such as G-box, Hex, C-box and As-1. The protein is localized in the nucleus and can homodimerize and can heterodimerize with other G group members.
Computational
Description (TAIR10)
basic region/leucine zipper transcription factor 16 (bZIP16); CONTAINS InterPro DOMAIN/s: Basic-leucine zipper (bZIP) transcription factor (InterPro:IPR004827), G-box binding, MFMR (InterPro:IPR012900), bZIP transcription factor, bZIP-1 (InterPro:IPR011616); BEST Arabidopsis thaliana protein match is: basic region/leucine zipper transcription factor 68 (TAIR:AT1G32150.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink).
Protein Annotations
eggNOG:ENOG410IE8MeggNOG:ENOG410Y53YEMBL:AB493577EMBL:AC005314
EMBL:BT022055EMBL:BT026441EMBL:CP002685EnsemblPlants:AT2G35530
EnsemblPlants:AT2G35530.1entrez:818118GeneID:818118GO:GO:0003700
GO:GO:0005634GO:GO:0006351GO:GO:0043565GO:GO:0045893
Gramene:AT2G35530.1hmmpanther:PTHR22952hmmpanther:PTHR22952:SF47HOGENOM:HOG000238141
IntAct:Q501B2InterPro:IPR004827InterPro:IPR012900iPTMnet:Q501B2
KEGG:ath:AT2G35530KO:K09060ncoils:CoilOMA:NGMTEVS
PaxDb:Q501B2Pfam:PF00170Pfam:PF07777Pfam:PF16596
Pfscan:PS50217PhylomeDB:Q501B2PIR:G84769PROSITE:PS00036
PROSITE:PS50217ProteinModelPortal:Q501B2Proteomes:UP000006548RefSeq:NP_850248.2
scanprosite:PS00036SMART:SM00338SMR:Q501B2STRING:3702.AT2G35530.1
SUPFAM:SSF57959TAIR:AT2G35530tair10-symbols:AtbZIP16tair10-symbols:bZIP16
UniGene:At.37663UniProt:Q501B2
Coordinates (TAIR10) chr2:-:14923280..14926025
Molecular Weight (calculated) 43111.70 Da
IEP (calculated) 5.28
GRAVY (calculated) -0.93
Length 409 amino acids
Sequence (TAIR10)
(BLAST)
001: MASNEMEKSS KEKEPKTPPP SSTAPPSSQE PSSAVSAGMA TPDWSGFQAY SPMPPPHGYV ASSPQPHPYM WGVQHMMPPY GTPPHPYVAM YPPGGMYAHP
101: SMPPGSYPYS PYAMPSPNGM TEVSGNTTGG TDGDAKQSEV KEKLPIKRSR GSLGSLNMIT GKNNEPGKNS GASANGAYSK SGESASDGSS EGSDGNSQND
201: SGSGLDGKDA EAASENGGSA NGPQNGSAGT PILPVSQTVP IMPMTAAGVP GPPTNLNIGM DYWGAPTSAG IPGMHGKVST PVPGVVAPGS RDGGHSQPWL
301: QDDRELKRQR RKQSNRESAR RSRLRKQAEC DELAQRAEVL NEENTNLRAE INKLKSQCEE LTTENTSLKD QLSLFPPLEG ISMDNDHQEP DTNQTGAAER
401: KVDSYKDST
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)