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AT3G20020.1
Subcellular Consensus
(Prediction and Experimental)
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SUBAcon:
plasma membrane 0.902
What is SUBAcon?
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no PPI data
Description (TAIR10) protein_coding : protein arginine methyltransferase 6
Curator
Summary (TAIR10)
Computational
Description (TAIR10)
protein arginine methyltransferase 6 (PRMT6); FUNCTIONS IN: protein methyltransferase activity, methyltransferase activity; INVOLVED IN: protein amino acid methylation; LOCATED IN: cytoplasm; EXPRESSED IN: 19 plant structures; EXPRESSED DURING: 7 growth stages; CONTAINS InterPro DOMAIN/s: Ribosomal L11 methyltransferase, PrmA (InterPro:IPR010456); BEST Arabidopsis thaliana protein match is: protein arginine methyltransferase 1A (TAIR:AT2G19670.1); Has 5878 Blast hits to 5804 proteins in 1733 species: Archae - 156; Bacteria - 3349; Metazoa - 1214; Fungi - 260; Plants - 392; Viruses - 1; Other Eukaryotes - 506 (source: NCBI BLink).
Protein Annotations
BioCyc:ARA:AT3G20020-MONOMERBioCyc:ARA:GQT-2309-MONOMEREC:2.1.1.-eggNOG:ENOG410XQYH
eggNOG:KOG1499EMBL:AP000383EMBL:BT029008EMBL:CP002686
EnsemblPlants:AT3G20020EnsemblPlants:AT3G20020.1entrez:821541Gene3D:3.40.50.150
GeneID:821541Genevisible:Q08A71GO:GO:0005829GO:GO:0006355
GO:GO:0008469GO:GO:0019919GO:GO:0034969GO:GO:0035242
hmmpanther:PTHR11006hmmpanther:PTHR11006:SF56HOGENOM:HOG000198521InParanoid:Q08A71
InterPro:IPR025799InterPro:IPR029063iPTMnet:Q08A71KEGG:ath:AT3G20020
KO:K11437OMA:GRFRFSCPANTHER:PTHR11006PaxDb:Q08A71
Pfam:PF06325Pfam:Q08A71Pfscan:PS51678PhylomeDB:Q08A71
PRIDE:Q08A71PRO:PR:Q08A71PROSITE:PS51678ProteinModelPortal:Q08A71
Proteomes:UP000006548RefSeq:NP_001078191.1RefSeq:NP_188637.2SMR:Q08A71
STRING:3702.AT3G20020.1SUPFAM:SSF53335TAIR:AT3G20020tair10-symbols:ATPRMT6
tair10-symbols:PRMT6UniGene:At.38316UniProt:Q08A71
Coordinates (TAIR10) chr3:-:6984055..6987945
Molecular Weight (calculated) 48273.90 Da
IEP (calculated) 5.68
GRAVY (calculated) -0.36
Length 435 amino acids
Sequence (TAIR10)
(BLAST)
001: MQSGGDFSNG FHGDHHRELE LEDKQGPSLS SFGRAKKRSH AGARDPRGGL ANVLRVSDQL GEHKSLETSE SSPPPCTDFD VAYFHSYAHV GIHEEMIKDR
101: ARTETYREAI MQHQSLIEGK VVVDVGCGTG ILSIFCAQAG AKRVYAVDAS DIAVQAKEVV KANGLSDKVI VLHGRVEDVE IDEEVDVIIS EWMGYMLLYE
201: SMLGSVITAR DRWLKPGGLI LPSHATLYMA PISHPDRYSH SIDFWRNVYG IDMSAMMQLA KQCAFEEPSV ESISGENVLT WPEVVKHIDC KTIKIQELDS
301: VTARYKFNSM MRAPMHGFAF WFDVEFSGPA SSPAKNTSET SIASGSSSIS PSGEVNQKKR TNPSDALVLS TSPESPPTHW QQTIVYFYDP IDVEQDQVIE
401: GSVTLSQSKE NKRFMNIHLE YSSAGRSFVK ESVMR
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)