AT5G10900.1
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Subcellular Consensus
(Prediction and Experimental) min:  :max.
SUBAcon:nucleus 0.994 What is SUBAcon? |
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| Experimental Localisations and PPI |
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SUBAcon links
AGI-AGI relationships |
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| Description (TAIR10) | protein_coding : Calcineurin-like metallo-phosphoesterase superfamily protein | ||||||||||||||||||||||||||||||||||||||||||||
| Curator Summary (TAIR10) |
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| Computational Description (TAIR10) |
Calcineurin-like metallo-phosphoesterase superfamily protein; FUNCTIONS IN: hydrolase activity, protein serine/threonine phosphatase activity; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 13 plant structures; EXPRESSED DURING: 8 growth stages; CONTAINS InterPro DOMAIN/s: Metallophosphoesterase (InterPro:IPR004843), Serine/threonine-specific protein phosphatase/bis(5-nucleosyl)-tetraphosphatase (InterPro:IPR006186); BEST Arabidopsis thaliana protein match is: serine/threonine phosphatase 7 (TAIR:AT5G63870.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). | ||||||||||||||||||||||||||||||||||||||||||||
| Protein Annotations |
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| Coordinates (TAIR10) | chr5:-:3436413..3439221 | ||||||||||||||||||||||||||||||||||||||||||||
| Molecular Weight (calculated) | 67629.40 Da | ||||||||||||||||||||||||||||||||||||||||||||
| IEP (calculated) | 4.68 | ||||||||||||||||||||||||||||||||||||||||||||
| GRAVY (calculated) | -0.35 | ||||||||||||||||||||||||||||||||||||||||||||
| Length | 600 amino acids | ||||||||||||||||||||||||||||||||||||||||||||
| Sequence (TAIR10) (BLAST) |
001: MPPPEISKRV LDSKLEACKF AFLKLSAVKT TRMKNYKQLR TLLMLKEISR RGADRDFLKD PENSVTRILC SVLKQVVSNS DRSLKSLRGF QYETLDDQEK 101: QQVTRMIASV QGMGSRKYEP ETVDHLEDMT EPIEMEIYLG NGDGGDFGDI VLEPISWPLE SQLTLEWVET LMGLLNQSTW KNSVSEFSLI LPHSVAVSLV 201: DCASQILEKE ANCVKINGCS EDSRVIVVGD LHGQLHDLLK IFDQSGRPSQ NQCFVFNGNY IGRGSWSLEV FLVLLAWKIM MPENVILLRG SSETRVSAEE 301: LDFLKDICDR YGEHGPMLYS KCIDCFKMLP LASVISNSVY TTHGGLFQSC GVHEESPNPS LLLGSLEELD KIERRQAGEN DDENITLNHV LWSCPWMADG 401: LSESNYKGLL WGADCTETFL QQSNLKMIIR SHEGPDARAD REDMGNMLSG YSIDHEVESG KLCTVFSASM FSQGSRNYEN EGAYAVLEPP NFTEPVFVSY 501: TVENVPRLQH QIISDGSSTQ QQQMWENRTG HGFASMGISN PPSWTVPLPN DPSQILQLRE PPQVFEGLPL PDNIQEPHKS NYDYLFRLIS ALKQEIQTRV |
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| See Also |
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Citation
If you find this resource useful please cite one of the following publications:
Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)
Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)