AT2G41020.1
|
Subcellular Consensus
(Prediction and Experimental) min:  :max.
SUBAcon:nucleus 1.000 What is SUBAcon? |
|||||||||||||||||||||||||||||||||||||
| Experimental Localisations and PPI |
|
||||||||||||||||||||||||||||||||||||
|
SUBAcon links
AGI-AGI relationships |
|
||||||||||||||||||||||||||||||||||||
| Description (TAIR10) | protein_coding : WW domain-containing protein | ||||||||||||||||||||||||||||||||||||
| Curator Summary (TAIR10) |
|||||||||||||||||||||||||||||||||||||
| Computational Description (TAIR10) |
WW domain-containing protein; CONTAINS InterPro DOMAIN/s: WW/Rsp5/WWP (InterPro:IPR001202); Has 960 Blast hits to 908 proteins in 168 species: Archae - 0; Bacteria - 0; Metazoa - 521; Fungi - 106; Plants - 105; Viruses - 0; Other Eukaryotes - 228 (source: NCBI BLink). | ||||||||||||||||||||||||||||||||||||
| Protein Annotations |
|
||||||||||||||||||||||||||||||||||||
| Coordinates (TAIR10) | chr2:+:17117425..17120901 | ||||||||||||||||||||||||||||||||||||
| Molecular Weight (calculated) | 49817.20 Da | ||||||||||||||||||||||||||||||||||||
| IEP (calculated) | 6.95 | ||||||||||||||||||||||||||||||||||||
| GRAVY (calculated) | -0.81 | ||||||||||||||||||||||||||||||||||||
| Length | 463 amino acids | ||||||||||||||||||||||||||||||||||||
| Sequence (TAIR10) (BLAST) |
001: MGEELQYQQN GSSVTSNYGY GSSLAYDQSQ DIESAANTAL LREQEIETQK IIQGQREAGT SVAGDSKHNT DILRDRADPN ALKEHLLKFT ANHRAEAAAK 101: RGGSVSTCGE GNVDVGNGYG IPGGVAYAGH SELSGKPEPT NASNNLPEYL KQKLKARGIL RDGAGAVTSN PEDTSAVSWN RQATLPFQAN ASTLPLGWVD 201: AKDPASGATY YYNQHTGTCQ WERPVELSYA TSSAPPVLSK EEWIETFDEA SGHKYFYNTR THVSQWEPPA SLQKPAATNS NNAVTQSTAN GKGEHPPSQL 301: PRCSGCGGWG VGLVQRWGYC VHCTRVFNLP EKQFLPAHLN HFTNAGDSGQ KDPNQRSSSK PPMKKVIGKK RAHAEDDELD PMDPSSYSDA PRGGWVVGLK 401: GVQPRAADTT ASGPLFQQRP YPSPGAVLRR NAEVASSQKK KPNSQFTEIT KRGDGSDGLG DAD |
||||||||||||||||||||||||||||||||||||
| See Also |
|
||||||||||||||||||||||||||||||||||||
Citation
If you find this resource useful please cite one of the following publications:
Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)
Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)