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AT2G30575.1
Subcellular Consensus
(Prediction and Experimental)
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SUBAcon:
endoplasmic reticulum 0.806
What is SUBAcon?
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no PPI data
Description (TAIR10) protein_coding : los glycosyltransferase 5
Curator
Summary (TAIR10)
Encodes a protein with putative galacturonosyltransferase activity.
Computational
Description (TAIR10)
los glycosyltransferase 5 (LGT5); FUNCTIONS IN: polygalacturonate 4-alpha-galacturonosyltransferase activity, transferase activity, transferring glycosyl groups; INVOLVED IN: carbohydrate biosynthetic process; LOCATED IN: endomembrane system; CONTAINS InterPro DOMAIN/s: Glycosyl transferase, family 8 (InterPro:IPR002495); BEST Arabidopsis thaliana protein match is: galacturonosyltransferase 6 (TAIR:AT1G06780.1); Has 1483 Blast hits to 1481 proteins in 282 species: Archae - 0; Bacteria - 397; Metazoa - 163; Fungi - 22; Plants - 825; Viruses - 0; Other Eukaryotes - 76 (source: NCBI BLink).
Protein Annotations
CAZy:GT8EC:2.4.1.-eggNOG:ENOG410IKF8eggNOG:ENOG410YA0P
EMBL:AY081313EMBL:BT002563EMBL:CP002685EMBL:U93215
EnsemblPlants:AT2G30575EnsemblPlants:AT2G30575.1entrez:817607ExpressionAtlas:Q8RXE1
Gene3D:3.90.550.10GeneID:817607GO:GO:0000139GO:GO:0016021
GO:GO:0045489GO:GO:0047262GO:GO:0071555Gramene:AT2G30575.1
gramene_pathway:2.4.1.43gramene_pathway:PWY-1061hmmpanther:PTHR32116hmmpanther:PTHR32116:SF0
HOGENOM:HOG000239479InParanoid:Q8RXE1InterPro:IPR002495InterPro:IPR029044
InterPro:IPR029993KEGG:00051+2.4.1.-KEGG:00512+2.4.1.-KEGG:00513+2.4.1.-
KEGG:00514+2.4.1.-KEGG:00522+2.4.1.-KEGG:00533+2.4.1.-KEGG:00540+2.4.1.-
KEGG:00550+2.4.1.-KEGG:00561+2.4.1.-KEGG:00563+2.4.1.-KEGG:00600+2.4.1.-
KEGG:00601+2.4.1.-KEGG:00603+2.4.1.-KEGG:00604+2.4.1.-KEGG:00906+2.4.1.-
KEGG:00908+2.4.1.-KEGG:00941+2.4.1.-KEGG:00942+2.4.1.-KEGG:00944+2.4.1.-
KEGG:00945+2.4.1.-KEGG:00965+2.4.1.-KEGG:ath:AT2G30575KO:K13648
OMA:RVRTKELPANTHER:PTHR32116PaxDb:Q8RXE1Pfam:PF01501
Pfam:Q8RXE1PhylomeDB:Q8RXE1PRIDE:Q8RXE1PRO:PR:Q8RXE1
ProteinModelPortal:Q8RXE1ProteinModelPortal:W8PVM7Proteomes:UP000006548RefSeq:NP_850150.1
STRING:3702.AT2G30575.1SUPFAM:SSF53448TAIR:AT2G30575tair10-symbols:GAUT5
tair10-symbols:LGT5TMHMM:TMhelixUniGene:At.44029UniPathway:UPA00845
UniProt:Q8RXE1UniProt:W8PVM7
Coordinates (TAIR10) chr2:-:13020564..13023906
Molecular Weight (calculated) 69889.40 Da
IEP (calculated) 7.99
GRAVY (calculated) -0.46
Length 610 amino acids
Sequence (TAIR10)
(BLAST)
001: MNQVRRWQRI LILSLLLLSV LAPIVFVSNR LKSITSVDRG EFIEELSDIT DKTEDELRLT AIEQDEEGLK EPKRILQDRD FNSVVLSNSS DKSNDTVQSN
101: EGDQKNFLSE VDKGNNHKPK EEQAVSQKTT VSSNAEVKIS ARDIQLNHKT EFRPPSSKSE KNTRVQLERA TDERVKEIRD KIIQAKAYLN LALPGNNSQI
201: VKELRVRTKE LERATGDTTK DKYLPKSSPN RLKAMEVALY KVSRAFHNCP AIATKLQAMT YKTEEQARAQ KKQAAYLMQL AARTTPKGLH CLSMRLTTEY
301: FTLDHEKRQL LQQSYNDPDL YHYVVFSDNV LASSVVVNST ISSSKEPDKI VFHVVTDSLN YPAISMWFLL NPSGRASIQI LNIDEMNVLP LYHAELLMKQ
401: NSSDPRIISA LNHARFYLPD IFPGLNKIVL FDHDVVVQRD LTRLWSLDMT GKVVGAVETC LEGDPSYRSM DSFINFSDAW VSQKFDPKAC TWAFGMNLFD
501: LEEWRRQELT SVYLKYFDLG VKGHLWKAGG LPVGWLTFFG QTFPLEKRWN VGGLGHESGL RASDIEQAAV IHYDGIMKPW LDIGIDKYKR YWNIHVPYHH
601: PHLQRCNIHD
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)