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AT1G24490.1
Subcellular Consensus
(Prediction and Experimental)
min: heatmap :max

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SUBAcon:
plastid 1.000
ASURE: plastid
What is SUBAcon?
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
Description (TAIR10) protein_coding : OxaA/YidC-like membrane insertion protein
Curator
Summary (TAIR10)
Homologue of the Alb3/Oxa1/YidC family. ALB4 is almost identical to the Alb3/Oxa1/YidC domain of the previously described 110 kDa inner envelope protein ARTEMIS. However, ALB4 is expressed as a separate 55 kDa protein and is located in the thylakoid membrane of chloroplasts. Analysis of a T-DNA insertion line with a reduced level of Alb4 revealed chloroplasts with an altered ultrastructure. Mutant plastids are larger, more spherical in appearance and the grana stacks within the mutant lines are less appressed than in the wild-type chloroplasts. ALB4 is required for proper chloroplast biogenesis.
Computational
Description (TAIR10)
ALBINA 4 (ALB4); CONTAINS InterPro DOMAIN/s: Membrane insertion protein, OxaA/YidC (InterPro:IPR001708), Membrane insertion protein, OxaA/YidC, core (InterPro:IPR020001); BEST Arabidopsis thaliana protein match is: 63 kDa inner membrane family protein (TAIR:AT2G28800.1); Has 8883 Blast hits to 8828 proteins in 2598 species: Archae - 0; Bacteria - 5941; Metazoa - 162; Fungi - 75; Plants - 144; Viruses - 0; Other Eukaryotes - 2561 (source: NCBI BLink).
Protein Annotations
eggNOG:COG0706eggNOG:KOG1239EMBL:AC000103EMBL:AM177312
EMBL:CP002684EnsemblPlants:AT1G24490EnsemblPlants:AT1G24490.1entrez:839065
ExpressionAtlas:Q9FYL3GeneID:839065Genevisible:Q9FYL3GO:GO:0009507
GO:GO:0009535GO:GO:0009579GO:GO:0009658GO:GO:0016021
GO:GO:0051205GO:GO:0072598hmmpanther:PTHR12428hmmpanther:PTHR12428:SF18
HOGENOM:HOG000240550InParanoid:Q9FYL3InterPro:IPR001708InterPro:IPR028055
iPTMnet:Q9FYL3ncoils:CoilOMA:ITNGMETPANTHER:PTHR12428
PaxDb:Q9FYL3Pfam:PF02096Pfam:Q9FYL3PhylomeDB:Q9FYL3
PIR:H86378PRIDE:Q9FYL3PRO:PR:Q9FYL3ProteinModelPortal:Q9FYL3
Proteomes:UP000006548RefSeq:NP_173858.5SMR:Q9FYL3STRING:3702.AT1G24490.1
TAIR:AT1G24490tair10-symbols:ALB4tair10-symbols:ARTEMISTCDB:2.A.9.2.2
TIGRfam:TIGR03592TIGRFAMs:TIGR03592TMHMM:TMhelixUniGene:At.28054
UniGene:At.41426UniProt:Q9FYL3
Coordinates (TAIR10) chr1:+:8682364..8684966
Molecular Weight (calculated) 55190.70 Da
IEP (calculated) 7.74
GRAVY (calculated) -0.34
Length 499 amino acids
Sequence (TAIR10)
(BLAST)
001: MSSTISLKPT HLILSSFSTG KVLQFRRSRF SHTPSSSSSR YRTLVAQLGF RPDSFDFIKD HAENLLYTIA DAAVSSSETF ESVAGTTTKT TQSNDWFSGI
101: ANYMETILKV LKDGLSTVHV PYSYGFAIIL LTVLVKAATF PLTKKQVESA MAMKSLTPQI KAIQERYAGD QEKIQLETAR LYKLAGINPL AGCLPTLATI
201: PVWIGLYRAL SNVADEGLLT EGFFWIPSLA GPTTVAARQN GSGISWLFPF IEGHPPLGWP DTLAYLVLPL LLVFSQYLSI QIMQSSQSND PAMKSSQAVT
301: KLLPLMIGYF ALSVPSGLSL YWLTNNILST AQQVWLQKYG GAKNPVEKFT NLVTKEDKTQ QIEKSFSEPL VQKSVSELKI PREKGGEKVT PECPKPGERF
401: RLLKEQEAKR RREKEERQKA EAALSNQNTD KAHEQDEKSD TAIVAEDDKK TELSAVDETS DGTVAVNGKP SIQKDETTNG TFGIGHDTEQ QHSHETEKR
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)