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AT4G25130.1
Subcellular Consensus
(Prediction and Experimental)
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SUBAcon:
plastid 1.000
ASURE: plastid
What is SUBAcon?
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
Description (TAIR10) protein_coding : peptide met sulfoxide reductase 4
Curator
Summary (TAIR10)
Encodes a chloroplast-localized methionine sulfoxide reductase that is a member of the MSRA family. Involved in protection of chloroplasts from oxidative stress.
Computational
Description (TAIR10)
peptide met sulfoxide reductase 4 (PMSR4); FUNCTIONS IN: peptide-methionine-(S)-S-oxide reductase activity; INVOLVED IN: protein modification process, cellular response to oxidative stress; LOCATED IN: chloroplast stroma, chloroplast; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 16 growth stages; CONTAINS InterPro DOMAIN/s: Peptide methionine sulphoxide reductase MsrA (InterPro:IPR002569); BEST Arabidopsis thaliana protein match is: peptidemethionine sulfoxide reductase 1 (TAIR:AT5G61640.1); Has 10332 Blast hits to 10330 proteins in 2437 species: Archae - 129; Bacteria - 6211; Metazoa - 196; Fungi - 136; Plants - 235; Viruses - 1; Other Eukaryotes - 3424 (source: NCBI BLink).
Protein Annotations
BioCyc:ARA:AT4G25130-MONOMERBRENDA:1.8.4.11EC:1.8.4.11eggNOG:COG0225
eggNOG:KOG1635EMBL:AL035523EMBL:AL161562EMBL:AY049303
EMBL:AY087550EMBL:BT001033EMBL:CP002687EMBL:X97326
EnsemblPlants:AT4G25130EnsemblPlants:AT4G25130.1entrez:828616Gene3D:3.30.1060.10
GeneID:828616Genevisible:P54150GO:GO:0005739GO:GO:0008113
GO:GO:0009416GO:GO:0009507GO:GO:0009570GO:GO:0009735
GO:GO:0009941GO:GO:0030091GO:GO:0034599Gramene:AT4G25130.1
HAMAP:MF_01401hmmpanther:PTHR10173hmmpanther:PTHR10173:SF32HOGENOM:HOG000263862
InParanoid:P54150IntAct:P54150InterPro:IPR002569InterPro:IPR028427
iPTMnet:P54150KEGG:ath:AT4G25130KO:K07304OMA:HNPRYED
PANTHER:PTHR10173PaxDb:P54150Pfam:P54150Pfam:PF01625
PhylomeDB:P54150PIR:T05534PRIDE:P54150PRO:PR:P54150
ProteinModelPortal:P54150Proteomes:UP000006548Reactome:R-ATH-5676934RefSeq:NP_194243.1
SMR:P54150STRING:3702.AT4G25130.1SUPFAM:SSF55068SwissPalm:P54150
TAIR:AT4G25130tair10-symbols:PMSR4TIGRfam:TIGR00401TIGRFAMs:TIGR00401
UniGene:At.24140UniProt:P54150
Coordinates (TAIR10) chr4:-:12898802..12899998
Molecular Weight (calculated) 28645.80 Da
IEP (calculated) 8.92
GRAVY (calculated) -0.53
Length 258 amino acids
Sequence (TAIR10)
(BLAST)
001: MQVLVVSPPL IAAASLSKPL NSLSKAALSF SRAKPICPFP QTSRRPISVY KSPMNNLFNR LGFGSRPQAQ ADPSSAAIAQ GPDDDVPSSG QQFAQFGAGC
101: FWGVELAYQR VPGVTKTEVG YSHGIVHNPS YEDVCTGTTG HNEVVRVQYD PKECSFESLL DVFWNRHDPT TLNRQGGDVG TQYRSGIYYY TDEQERIARE
201: AVEKQQKILN KRIVTEILPA TKFYRAENYH QQYLAKGGRM GLRQSAEKGC KDPIRCYG
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)