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AT2G43950.1
Subcellular Consensus
(Prediction and Experimental)
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SUBAcon:
plastid 1.000
What is SUBAcon?
Experimental Localisations and PPI
FP MS/MS PPI
  • PMID:31932409 (2020): plastid
  • PMID:31818904 (2020): mitochondrion
  • PMID:31615849 (2019): plastid plastid thylakoid
  • PMID:31520498 (2020): mitochondrion
  • PMID:31023727 (2019): mitochondrion
  • PMID:30962257 (2019): plastid
  • PMID:30961429 (2019): nucleus
  • PMID:30865669 (2019): plastid
  • PMID:30135097 (2018): plastid
  • PMID:29967049 (2018): plastid
  • PMID:28865150 (2017): extracellular region plant-type cell wall
  • PMID:27137770 (2016): plastid plastid stroma
  • PMID:25900983 (2015): Golgi trans-Golgi network multivesicular body
  • PMID:25900983 (2015): Golgi trans-Golgi network early endosome
  • PMID:24872594 (2014): plastid plastid envelope plastid outer membrane
  • PMID:24124904 (2013): plastid
  • PMID:22923678 (2012): plastid
  • PMID:22550958 (2012): plastid
  • PMID:21988472 (2012): plant-type vacuole plant-type vacuole membrane
  • PMID:21896887 (2011): mitochondrion mitochondrial envelope mitochondrial outer membrane
  • PMID:20061580 (2010): plastid plastid envelope
  • PMID:19334764 (2009): plasma membrane
  • PMID:16618929 (2006): unclear
  • PMID:15215502 (2004): plant-type vacuole
  • PMID:12938931 (2003): plastid
SUBAcon links
AGI-AGI relationships
Coexpression PPI
Description (TAIR10) protein_coding : chloroplast outer envelope protein 37
Curator
Summary (TAIR10)
Constitutes a peptide sensitive ion channel in chloroplast outer membranes. Accumulates in germinating seeds and developing embryos.
Computational
Description (TAIR10)
chloroplast outer envelope protein 37 (OEP37); FUNCTIONS IN: ion channel activity; INVOLVED IN: cation transport; LOCATED IN: in 6 components; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; Has 35 Blast hits to 35 proteins in 11 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 35; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
Protein Annotations
eggNOG:ENOG410IJ87eggNOG:ENOG410ZZSDEMBL:AC004005EMBL:AY045937
EMBL:AY079409EMBL:CP002685EnsemblPlants:AT2G43950EnsemblPlants:AT2G43950.1
entrez:819000GeneID:819000Genevisible:O80565GO:GO:0005216
GO:GO:0005739GO:GO:0006812GO:GO:0009507GO:GO:0009536
GO:GO:0009706GO:GO:0009941GO:GO:0015288GO:GO:0016020
GO:GO:0031359GO:GO:0034220GO:GO:0042802GO:GO:0046930
hmmpanther:PTHR35484hmmpanther:PTHR35484:SF2HOGENOM:HOG000239249InParanoid:O80565
IntAct:O80565KEGG:ath:AT2G43950OMA:GIVRSHVPaxDb:O80565
Pfam:O80565PhylomeDB:O80565PIR:T00675PRIDE:O80565
PRO:PR:O80565ProteinModelPortal:O80565Proteomes:UP000006548RefSeq:NP_566003.1
RefSeq:NP_850405.2RefSeq:NP_973684.1STRING:3702.AT2G43950.1SwissPalm:O80565
TAIR:AT2G43950tair10-symbols:ATOEP37tair10-symbols:OEP37TCDB:1.B.47.1.2
UniGene:At.19493UniProt:O80565
Coordinates (TAIR10) chr2:-:18200553..18202644
Molecular Weight (calculated) 38837.30 Da
IEP (calculated) 9.57
GRAVY (calculated) -0.54
Length 343 amino acids
Sequence (TAIR10)
(BLAST)
001: MADPSSQNPN LATPPPPSSP SPTHQIQSGT SELSPPSRPP CSTLSFLKTA NRPKLRVTSE FDSDSLLFLN KVSCKLFDNL AKLKLSFQNN SQREISQPQV
101: SFTSKHVSVL YDVEEKNTFI KSTLDVHPRL QLRALHNVKA QQGEVAMEAN LTEPGYSLEL SSPVPIGYPR ATLKFPLGEI SLQEKDEEEE EKQKRTLSVN
201: GILKRQVMNG VCTALYTDEE LRLRYAYKDD ALSFIPSISL PSNAASFAFK RRFSPSDKLS YWYNFDSNMW SAVYKRTYGK DYKLKAGYDS DVRLGWASLW
301: VGDEAGKVKT TPMKMKVQFM LQVPQDDIKS SVLMFRVKKR WDI
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)