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AT1G10700.1
Subcellular Consensus
(Prediction and Experimental)
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SUBAcon:
plastid 1.000
What is SUBAcon?
Experimental Localisations and PPI
FP MS/MS PPI
  • PMID:31520498 (2020): mitochondrion
  • PMID:31023727 (2019): mitochondrion
  • PMID:29967049 (2018): plastid
  • PMID:28865150 (2017): extracellular region plant-type cell wall
  • PMID:26572690 (2016): extracellular region plant-type cell wall
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no PPI data
Description (TAIR10) protein_coding : phosphoribosyl pyrophosphate (PRPP) synthase 3
Curator
Summary (TAIR10)
Encodes a P-independent phosphoribosyl pyrophosphate (PRPP) synthase.
Computational
Description (TAIR10)
phosphoribosyl pyrophosphate (PRPP) synthase 3 (PRS3); FUNCTIONS IN: magnesium ion binding, ribose phosphate diphosphokinase activity; INVOLVED IN: nucleotide biosynthetic process, nucleoside metabolic process; LOCATED IN: chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Phosphoribosyltransferase (InterPro:IPR000836), Phosphoribosyl pyrophosphokinase (InterPro:IPR005946); BEST Arabidopsis thaliana protein match is: Phosphoribosyltransferase family protein (TAIR:AT2G42910.1); Has 9536 Blast hits to 9535 proteins in 2732 species: Archae - 207; Bacteria - 5887; Metazoa - 527; Fungi - 344; Plants - 201; Viruses - 8; Other Eukaryotes - 2362 (source: NCBI BLink).
Protein Annotations
BioCyc:ARA:AT1G10700-MONOMERBioGrid:22853EC:2.7.6.1eggNOG:COG0462
eggNOG:KOG1448EMBL:AC007354EMBL:AC009398EMBL:AJ012406
EMBL:AY058091EMBL:AY090310EMBL:CP002684EnsemblPlants:AT1G10700
EnsemblPlants:AT1G10700.1entrez:837613Gene3D:3.40.50.2020GeneID:837613
Genevisible:Q93Z66GO:GO:0000287GO:GO:0004749GO:GO:0005524
GO:GO:0009116GO:GO:0009165GO:GO:0009507GO:GO:0016301
Gramene:AT1G10700.1gramene_pathway:2.7.6.1gramene_pathway:PWY0-662gramene_plant_reactome:1119278
gramene_plant_reactome:6875539hmmpanther:PTHR10210hmmpanther:PTHR10210:SF45HOGENOM:HOG000238235
InParanoid:Q93Z66InterPro:IPR000836InterPro:IPR005946InterPro:IPR029057
InterPro:IPR029099KEGG:00030+2.7.6.1KEGG:00230+2.7.6.1KEGG:ath:AT1G10700
OMA:HTIRGRHPaxDb:Q93Z66Pfam:PF00156Pfam:PF13793
Pfam:Q93Z66PhylomeDB:Q93Z66PIR:D86240PIR:T52591
PRIDE:Q93Z66PRO:PR:Q93Z66ProteinModelPortal:Q93Z66Proteomes:UP000006548
RefSeq:NP_172540.1SMR:Q93Z66STRING:3702.AT1G10700.1SUPFAM:SSF53271
TAIR:AT1G10700tair10-symbols:PRS3TIGRfam:TIGR01251TIGRFAMs:TIGR01251
UniGene:At.16545unipathway:UPA00087UniProt:Q93Z66
Coordinates (TAIR10) chr1:+:3554157..3556274
Molecular Weight (calculated) 44699.30 Da
IEP (calculated) 8.02
GRAVY (calculated) -0.05
Length 411 amino acids
Sequence (TAIR10)
(BLAST)
001: MAAISPANAT TAASLSLPQF SSTSSSLSSS SSPSFLNFKT ASVSNRCIKC GVRSLENHSG HRSLDFLSNG DPISLINPNS SSPITMAAAT SESGSKSSKR
101: VCLFHSDETR DLAERIVAKS DCIELRSINW KKFDDGFPNL FIQNAQGIRG QHVAFLASFS SPAVIFEQLS VIYALPKLFV SSFTLVLPFF PTGTSERMED
201: EGDVATAFTL ARILSNIPTS RGGPTSLVTF DIHALQERFY FGDTILPCFE SGIPLLKSRL QSLPDSDNIS IAFPDDGAWK RFHKQLQHYP TIVCNKVRMG
301: DKRIVRIKEG DAEGRHVVIV DDLVQSGGTL IECQKVLAAH GAAKISAYVT HGIFPRSSWK RFKLDTKGDP AEGLSYFWIT DSCGMTVKEV MNKPPFEVLS
401: LAGSIASALQ V
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)