AT5G63980.1
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Subcellular Consensus
(Prediction and Experimental) min:  :max.
SUBAcon:plastid 1.000 What is SUBAcon? |
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| Experimental Localisations and PPI |
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SUBAcon links
AGI-AGI relationships |
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| Description (TAIR10) | protein_coding : Inositol monophosphatase family protein | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| Curator Summary (TAIR10) |
Encodes a bifunctional protein that has 3'(2'),5'-bisphosphate nucleotidase and inositol polyphosphate 1-phosphatase activities and rescues sulfur assimilation mutants in yeast. It is involved in the response to cold, drought (negative regulator of drought tolerance), and ABA. Mutants in this gene exhibit enhanced induction of stress genes in response to cold, ABA, salt and dehydration due to higher accumulation of the second messenger, inositol (1,4,5)- triphosphate (IP(3)). Involved in degradation of small mRNAs. Mutants also affect the accumulation of miRNA target cleavage products. Regulates light-dependent repression of hypocotyl elongation and flowering time via its 3'(2'),5'-bisphosphate nucleotidase activity. | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| Computational Description (TAIR10) |
SAL1; FUNCTIONS IN: 3'(2'),5'-bisphosphate nucleotidase activity, nucleotide phosphatase activity, inositol or phosphatidylinositol phosphatase activity; INVOLVED IN: in 15 processes; LOCATED IN: nucleus, chloroplast, chloroplast stroma, cytoplasm; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Inositol monophosphatase (InterPro:IPR000760), 3(2),5 -bisphosphate nucleotidase HAL2 (InterPro:IPR006239), Inositol monophosphatase, metal-binding site (InterPro:IPR020583); BEST Arabidopsis thaliana protein match is: Inositol monophosphatase family protein (TAIR:AT5G64000.1); Has 8292 Blast hits to 8290 proteins in 1695 species: Archae - 42; Bacteria - 5356; Metazoa - 208; Fungi - 241; Plants - 302; Viruses - 0; Other Eukaryotes - 2143 (source: NCBI BLink). | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| Protein Annotations |
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| Coordinates (TAIR10) | chr5:+:25609840..25611802 | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| Molecular Weight (calculated) | 43511.70 Da | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| IEP (calculated) | 6.38 | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| GRAVY (calculated) | -0.17 | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| Length | 407 amino acids | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| Sequence (TAIR10) (BLAST) |
001: MMSINCFRTA KAPLQSFVAV RTNSRPRNSS NRLVSVFGRK SSSPSFVTLR VVSSMAYEKE LDAAKKAASL AARLCQKVQK ALLQSDVQSK SDKSPVTVAD 101: YGSQAVVSLV LEKELSSEPF SLVAEEDSGD LRKDGSQDTL ERITKLVNDT LATEESFNGS TLSTDDLLRA IDCGTSEGGP NGRHWVLDPI DGTKGFLRGD 201: QYAVALGLLE EGKVVLGVLA CPNLPLASIA GNNKNKSSSD EIGCLFFATI GSGTYMQLLD SKSSPVKVQV SSVENPEEAS FFESFEGAHS LHDLSSSIAN 301: KLGVKAPPVR IDSQAKYGAL SRGDGAIYLR FPHKGYREKI WDHVAGAIVV TEAGGIVTDA AGKPLDFSKG KYLDLDTGII VANEKLMPLL LKAVRDSIAE 401: QEKASAL |
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| See Also |
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Citation
If you find this resource useful please cite one of the following publications:
Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)
Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)