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AT2G30860.1
Subcellular Consensus
(Prediction and Experimental)
min: heatmap :max

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SUBAcon:
cytosol 1.000
What is SUBAcon?
Experimental Localisations and PPI
FP MS/MS PPI
  • PMID:31615849 (2019): plastid plastid thylakoid
  • PMID:31520498 (2020): mitochondrion
  • PMID:31186290 (2019): cytosol None
  • PMID:30962257 (2019): plastid
  • PMID:30783145 (2019): extracellular region plant-type cell wall
  • PMID:30447334 (2019): plasma membrane
  • PMID:29104584 (2017): nucleus nuclear matrix nucleolus
  • PMID:28865150 (2017): extracellular region plant-type cell wall
  • PMID:27943495 (2017): mitochondrion
  • PMID:27177187 (2016): nucleus
  • PMID:26781341 (2016): plasma membrane
  • PMID:26572690 (2016): extracellular region plant-type cell wall
  • PMID:25852701 (2015): extracellular region apoplast
  • PMID:25641898 (2015): plasma membrane
  • PMID:24361574 (2014): plastid plastid stroma
  • PMID:24124904 (2013): plastid
  • PMID:24012629 (2013): nucleus
  • PMID:23673981 (2013): plastid plastid stroma plastoglobules
  • PMID:22215637 (2012): plasma membrane
  • PMID:21988472 (2012): plant-type vacuole plant-type vacuole membrane
  • PMID:21533090 (2011): extracellular region plant-type cell wall
  • PMID:21166475 (2011): cytosol
  • PMID:20061580 (2010): plastid plastid stroma
  • PMID:19334764 (2009): plasma membrane
  • PMID:18633119 (2008): plastid plastid stroma
  • PMID:17644812 (2007): plasma membrane
  • PMID:16648217 (2006): plastid
  • PMID:15539469 (2004): plant-type vacuole
  • PMID:14729914 (2004): plastid
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no PPI data
Description (TAIR10) protein_coding : glutathione S-transferase PHI 9
Curator
Summary (TAIR10)
Encodes glutathione transferase belonging to the phi class of GSTs. Naming convention according to Wagner et al. (2002).
Computational
Description (TAIR10)
glutathione S-transferase PHI 9 (GSTF9); FUNCTIONS IN: glutathione transferase activity, glutathione peroxidase activity, copper ion binding, glutathione binding; INVOLVED IN: response to cadmium ion, response to zinc ion, defense response to bacterium, toxin catabolic process, defense response; LOCATED IN: in 7 components; EXPRESSED IN: 29 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Thioredoxin fold (InterPro:IPR012335), Glutathione S-transferase, C-terminal (InterPro:IPR004046), Glutathione S-transferase, C-terminal-like (InterPro:IPR010987), Glutathione S-transferase/chloride channel, C-terminal (InterPro:IPR017933), Glutathione S-transferase, N-terminal (InterPro:IPR004045), Thioredoxin-like fold (InterPro:IPR012336); BEST Arabidopsis thaliana protein match is: glutathione S-transferase PHI 10 (TAIR:AT2G30870.1); Has 15708 Blast hits to 15682 proteins in 1454 species: Archae - 0; Bacteria - 8375; Metazoa - 2291; Fungi - 944; Plants - 1150; Viruses - 0; Other Eukaryotes - 2948 (source: NCBI BLink).
Protein Annotations
BioGrid:2985EC:2.5.1.18eggNOG:COG0625eggNOG:KOG0867
EMBL:AC004669EMBL:AF372905EMBL:AK318883EMBL:BT002679
EMBL:CP002685EMBL:Y12295EnsemblPlants:AT2G30860EnsemblPlants:AT2G30860.1
entrez:817636Gene3D:1.20.1050.10Gene3D:3.40.30.10GeneID:817636
Genevisible:O80852GO:GO:0004364GO:GO:0004602GO:GO:0005507
GO:GO:0005737GO:GO:0005773GO:GO:0005829GO:GO:0005886
GO:GO:0006749GO:GO:0006952GO:GO:0009407GO:GO:0009506
GO:GO:0009507GO:GO:0009570GO:GO:0009579GO:GO:0010043
GO:GO:0042742GO:GO:0043295GO:GO:0046686GO:GO:0048046
GO:GO:0098869gramene_pathway:1.11.1.9gramene_pathway:PWY-4081hmmpanther:PTHR11260
hmmpanther:PTHR11260:SF186HOGENOM:HOG000125746InParanoid:O80852IntAct:O80852
InterPro:IPR004045InterPro:IPR004046InterPro:IPR010987InterPro:IPR012336
iPTMnet:O80852KEGG:ath:AT2G30860KO:K00799OMA:NYHPPIY
PaxDb:O80852Pfam:O80852Pfam:PF00043Pfam:PF02798
Pfscan:PS50404Pfscan:PS50405PhylomeDB:O80852PIR:E84713
PRIDE:O80852PRO:PR:O80852PROSITE:PS50404PROSITE:PS50405
ProteinModelPortal:O80852Proteomes:UP000006548RefSeq:NP_001077983.1RefSeq:NP_180643.1
SMR:O80852STRING:3702.AT2G30860.1SUPFAM:SSF47616SUPFAM:SSF52833
TAIR:AT2G30860tair10-symbols:ATGSTF7tair10-symbols:ATGSTF9tair10-symbols:GLUTTR
tair10-symbols:GSTF9UniGene:At.22585UniGene:At.74970UniGene:At.74982
UniProt:O80852
Coordinates (TAIR10) chr2:+:13139132..13140057
Molecular Weight (calculated) 24147.10 Da
IEP (calculated) 6.64
GRAVY (calculated) -0.14
Length 215 amino acids
Sequence (TAIR10)
(BLAST)
001: MVLKVYGPHF ASPKRALVTL IEKGVAFETI PVDLMKGEHK QPAYLALQPF GTVPAVVDGD YKIFESRAVM RYVAEKYRSQ GPDLLGKTVE DRGQVEQWLD
101: VEATTYHPPL LNLTLHIMFA SVMGFPSDEK LIKESEEKLA GVLDVYEAHL SKSKYLAGDF VSLADLAHLP FTDYLVGPIG KAYMIKDRKH VSAWWDDISS
201: RPAWKETVAK YSFPA
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)