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AT5G01500.1
Subcellular Consensus
(Prediction and Experimental)
min: heatmap :max

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SUBAcon:
plastid 1.000
ASURE: plastid
What is SUBAcon?
Experimental Localisations and PPI
FP MS/MS PPI
  • PMID:23085732 (2012): plastid plastid envelope
  • PMID:23085732 (2012): plastid plastid thylakoid
  • PMID:17261580 (2007): plastid plastid thylakoid plastid thylakoid membrane
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no PPI data
Description (TAIR10) protein_coding : thylakoid ATP/ADP carrier
Curator
Summary (TAIR10)
encodes an ATP/ADP carrier that is located to the thylakoid membrane involved in providing ATP during thylakoid biogenesis and turnover
Computational
Description (TAIR10)
thylakoid ATP/ADP carrier (TAAC); FUNCTIONS IN: binding, transporter activity, ATP transmembrane transporter activity; INVOLVED IN: photosystem II repair, transport, photoprotection; LOCATED IN: in 7 components; EXPRESSED IN: 27 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Mitochondrial carrier protein (InterPro:IPR002067), Mitochondrial substrate carrier (InterPro:IPR001993), Mitochondrial substrate/solute carrier (InterPro:IPR018108); BEST Arabidopsis thaliana protein match is: Mitochondrial substrate carrier family protein (TAIR:AT3G51870.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).
Protein Annotations
eggNOG:ENOG410ZRF1eggNOG:KOG0752EMBL:AL161946EMBL:AY074566
EMBL:AY086408EMBL:BT006336EMBL:CP002688EnsemblPlants:AT5G01500
EnsemblPlants:AT5G01500.1entrez:831861Gene3D:1.50.40.10GeneID:831861
Genevisible:Q9M024GO:GO:0003735GO:GO:0005347GO:GO:0005739
GO:GO:0006412GO:GO:0009507GO:GO:0009526GO:GO:0009535
GO:GO:0009536GO:GO:0009941GO:GO:0010117GO:GO:0010206
GO:GO:0015867GO:GO:0016021GO:GO:0042651Gramene:AT5G01500.1
hmmpanther:PTHR24089hmmpanther:PTHR24089:SF190HOGENOM:HOG000165726InParanoid:Q9M024
InterPro:IPR002067InterPro:IPR018108InterPro:IPR023395KEGG:ath:AT5G01500
KO:K14684OMA:FYNGLGPPaxDb:Q9M024Pfam:PF00153
Pfam:Q9M024Pfscan:PS50920PhylomeDB:Q9M024PIR:T48171
PRIDE:Q9M024PRINTS:PR00926PRO:PR:Q9M024PROSITE:PS50920
ProteinModelPortal:Q9M024Proteomes:UP000006548RefSeq:NP_195770.1SMR:Q9M024
STRING:3702.AT5G01500.1SUPFAM:0048588SUPFAM:SSF103506TAIR:AT5G01500
tair10-symbols:TAACTCDB:2.A.29.23.3UniGene:At.43427UniProt:Q9M024
Coordinates (TAIR10) chr5:+:199017..201329
Molecular Weight (calculated) 45092.70 Da
IEP (calculated) 10.38
GRAVY (calculated) -0.08
Length 415 amino acids
Sequence (TAIR10)
(BLAST)
001: MGEEKSLLQF RSFPSLKTSD FALTEEPSWR LENNVSSNRR RGNKRSGGVF TNFASLSVAI RRDRRESTFN GRNGGGGGAF ASVSVVIPKE EDEFAPTSAQ
101: LLKNPIALLS IVPKDAALFF AGAFAGAAAK SVTAPLDRIK LLMQTHGVRA GQQSAKKAIG FIEAITLIGK EEGIKGYWKG NLPQVIRIVP YSAVQLFAYE
201: TYKKLFRGKD GQLSVLGRLG AGACAGMTST LITYPLDVLR LRLAVEPGYR TMSQVALNML REEGVASFYN GLGPSLLSIA PYIAINFCVF DLVKKSLPEK
301: YQQKTQSSLL TAVVAAAIAT GTCYPLDTIR RQMQLKGTPY KSVLDAFSGI IAREGVVGLY RGFVPNALKS MPNSSIKLTT FDIVKKLIAA SEKEIQRIAD
401: DNRKKASPNT IDEQT
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)