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AT5G05730.1
Subcellular Consensus
(Prediction and Experimental)
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SUBAcon:
plastid 1.000
What is SUBAcon?
Experimental Localisations and PPI
FP MS/MS PPI
  • PMID:31871212 (2020): mitochondrion
  • PMID:31520498 (2020): mitochondrion
  • PMID:31023727 (2019): mitochondrion
  • PMID:30783145 (2019): extracellular region plant-type cell wall
  • PMID:28865150 (2017): extracellular region plant-type cell wall
  • PMID:26572690 (2016): extracellular region plant-type cell wall
  • PMID:24872594 (2014): plastid plastid stroma
  • PMID:24361574 (2014): plastid plastid stroma
  • PMID:24124904 (2013): plastid
  • PMID:21841088 (2011): mitochondrion
  • PMID:21531424 (2011): plastid
  • PMID:20061580 (2010): plastid plastid stroma
  • PMID:18431481 (2008): plastid
SUBAcon links
AGI-AGI relationships
Coexpression PPI
Description (TAIR10) protein_coding : anthranilate synthase alpha subunit 1
Curator
Summary (TAIR10)
ASA1 encodes the alpha subunit of anthranilate synthase, which catalyzes the rate-limiting step of tryptophan synthesis. ASA1 is induced by ethylene, and forms a link between ethylene signalling and auxin synthesis in roots.
Computational
Description (TAIR10)
anthranilate synthase alpha subunit 1 (ASA1); FUNCTIONS IN: anthranilate synthase activity; INVOLVED IN: in 6 processes; LOCATED IN: chloroplast, anthranilate synthase complex; EXPRESSED IN: 27 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Anthranilate synthase component I, N-terminal (InterPro:IPR006805), Chorismate binding, C-terminal (InterPro:IPR015890), ADC synthase (InterPro:IPR005801), Anthranilate synthase component I (InterPro:IPR019999), Anthranilate synthase component I, PabB-like (InterPro:IPR005256); BEST Arabidopsis thaliana protein match is: anthranilate synthase 2 (TAIR:AT2G29690.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).
Protein Annotations
BioCyc:ARA:AT5G05730-MONOMERBioCyc:ARA:GQT-77-MONOMERBioGrid:15736EC:4.1.3.27
eggNOG:COG0147eggNOG:KOG1223EMBL:AB005237EMBL:AY072013
EMBL:CP002688EMBL:M92353EnsemblPlants:AT5G05730EnsemblPlants:AT5G05730.1
entrez:830457ExpressionAtlas:P32068Gene3D:3.60.120.10GeneID:830457
Genevisible:P32068GO:GO:0000162GO:GO:0004049GO:GO:0009507
GO:GO:0010600GO:GO:0046872gramene_pathway:4.1.3.27gramene_pathway:TRPSYN-PWY
hmmpanther:PTHR11236hmmpanther:PTHR11236:SF20HOGENOM:HOG000025142InParanoid:P32068
InterPro:IPR005256InterPro:IPR005801InterPro:IPR006805InterPro:IPR015890
InterPro:IPR019999iPTMnet:P32068KEGG:00400+4.1.3.27ncoils:Coil
PaxDb:P32068Pfam:P32068Pfam:PF00425Pfam:PF04715
PhylomeDB:P32068PIR:JQ1684PRIDE:P32068PRINTS:PR00095
PRO:PR:P32068ProteinModelPortal:P32068Proteomes:UP000006548RefSeq:NP_196192.1
SABIO-RK:P32068SMR:P32068STRING:3702.AT5G05730.2SUPFAM:SSF56322
TAIR:AT5G05730tair10-symbols:AMT1tair10-symbols:ASA1tair10-symbols:JDL1
tair10-symbols:TRP5tair10-symbols:WEI2TIGRfam:TIGR00564TIGRFAMs:TIGR00564
UniGene:At.285UniPathway:UPA00035UniProt:P32068
Coordinates (TAIR10) chr5:-:1719740..1722811
Molecular Weight (calculated) 66315.20 Da
IEP (calculated) 6.45
GRAVY (calculated) -0.31
Length 595 amino acids
Sequence (TAIR10)
(BLAST)
001: MSSSMNVATM QALTFSRRLL PSVASRYLSS SSVTVTGYSG RSSAYAPSFR SIKCVSVSPE ASIVSDTKKL ADASKSTNLI PIYRCIFSDQ LTPVLAYRCL
101: VKEDDREAPS FLFESVEPGS QMSSVGRYSV VGAQPAMEIV AKENKVIVMD HNNETMTEEF VEDPMEIPRK ISEKWNPDPQ LVQDLPDAFC GGWVGFFSYD
201: TVRYVEKRKL PFSKAPEDDR NLPDMHLGLY DDVVVFDHVE KKAYVIHWIR LDGSLPYEKA YSNGMQHLEN LVAKLHDIEP PKLAAGNVNL QTRQFGPSLD
301: NSNVTCEEYK EAVVKAKEHI LAGDIFQIVL SQRFERRTFA DPFEVYRALR VVNPSPYMGY LQARGCILVA SSPEILTKVK QNKIVNRPLA GTSKRGKNEV
401: EDKRLEKELL ENEKQCAEHI MLVDLGRNDV GKVTKYGSVK VEKLMNIERY SHVMHISSTV TGELQDGLTC WDVLRAALPV GTVSGAPKVK AMELIDELEP
501: TRRGPYSGGF GGVSFTGDMD IALSLRTIVF PTACQYNTMY SYKDANKRRE WVAYLQAGAG VVADSDPQDE HCECQNKAAG LARAIDLAES AFVKK
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)