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AT1G25220.1
Subcellular Consensus
(Prediction and Experimental)
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SUBAcon:
plastid 1.000
What is SUBAcon?
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
Description (TAIR10) protein_coding : anthranilate synthase beta subunit 1
Curator
Summary (TAIR10)
Catalyzes the first step of tryptophan biosynthesis: Chorismate L-Glutamine = Anthranilate Pyruvate L-Glutamate. Functions as a heterocomplex with anthranilate synthase alpha subunit (ASA1 or ASA2).
Computational
Description (TAIR10)
anthranilate synthase beta subunit 1 (ASB1); FUNCTIONS IN: anthranilate synthase activity; INVOLVED IN: in 6 processes; LOCATED IN: chloroplast; EXPRESSED IN: pericycle, cotyledon vascular system, primary root tip, root, lateral root primordium; CONTAINS InterPro DOMAIN/s: Glutamine amidotransferase class-I, C-terminal (InterPro:IPR000991), Glutamine amidotransferase superfamily (InterPro:IPR011702), Anthranilate synthase, glutamine amidotransferase domain (InterPro:IPR006221), Carbamoyl phosphate synthase, GATase domain (InterPro:IPR001317), Glutamine amidotransferase type 1 (InterPro:IPR017926), Anthranilate synthase component II/delta crystallin (InterPro:IPR006220); BEST Arabidopsis thaliana protein match is: Glutamine amidotransferase type 1 family protein (TAIR:AT5G57890.1); Has 24239 Blast hits to 24239 proteins in 3351 species: Archae - 587; Bacteria - 15803; Metazoa - 583; Fungi - 677; Plants - 202; Viruses - 0; Other Eukaryotes - 6387 (source: NCBI BLink).
Protein Annotations
BioCyc:ARA:GQT-1090-MONOMERBioGrid:24340EC:4.1.3.27eggNOG:COG0512
eggNOG:KOG0026EMBL:AC079374EMBL:AK226500EMBL:AY099834
EMBL:BT006303EMBL:CP002684EMBL:L22585EnsemblPlants:AT1G25220
EnsemblPlants:AT1G25220.1entrez:839103ExpressionAtlas:Q42565Gene3D:3.40.50.880
GeneID:839103Genevisible:Q42565GO:GO:0000162GO:GO:0004049
GO:GO:0006541GO:GO:0009507GO:GO:0010600gramene_pathway:4.1.3.27
gramene_pathway:TRPSYN-PWYhmmpanther:PTHR11922hmmpanther:PTHR11922:SF37HOGENOM:HOG000025029
IntAct:Q42565InterPro:IPR006221InterPro:IPR017926InterPro:IPR029062
KEGG:00400+4.1.3.27MEROPS:C26.A09PaxDb:Q42565Pfam:PF00117
Pfam:Q42565Pfscan:PS51273PhylomeDB:Q42565PIR:JQ2340
PRIDE:Q42565PRO:PR:Q42565PROSITE:PS51273ProteinModelPortal:Q42565
Proteomes:UP000006548RefSeq:NP_173893.1SABIO-RK:Q42565SMR:Q42565
STRING:3702.AT1G25220.2SUPFAM:SSF52317TAIR:AT1G25220tair10-symbols:ASB1
tair10-symbols:TRP4tair10-symbols:WEI7TIGRfam:TIGR00566TIGRFAMs:TIGR00566
UniGene:At.51757UniGene:At.7656UniPathway:UPA00035UniProt:Q42565
Coordinates (TAIR10) chr1:-:8837430..8839478
Molecular Weight (calculated) 30461.70 Da
IEP (calculated) 7.92
GRAVY (calculated) -0.23
Length 276 amino acids
Sequence (TAIR10)
(BLAST)
001: MAASTLYKSC LLQPKSGSTT RRLNPSLVNP LTNPTRVSVL GKSRRDVFAK ASIEMAESNS IPSVVVNSSK QHGPIIVIDN YDSFTYNLCQ YMGELGCHFE
101: VYRNDELTVE ELKKKNPRGV LISPGPGTPQ DSGISLQTVL ELGPLVPLFG VCMGLQCIGE AFGGKIVRSP FGVMHGKSSM VHYDEKGEEG LFSGLSNPFI
201: VGRYHSLVIE KDTFPSDELE VTAWTEDGLV MAARHRKYKH IQGVQFHPES IITTEGKTIV RNFIKIVEKK ESEKLT
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)