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AT1G04920.1
Subcellular Consensus
(Prediction and Experimental)
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SUBAcon:
plasma membrane 0.691
What is SUBAcon?
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no PPI data
Description (TAIR10) protein_coding : sucrose phosphate synthase 3F
Curator
Summary (TAIR10)
Encodes a protein with putative sucrose-phosphate synthase activity.
Computational
Description (TAIR10)
sucrose phosphate synthase 3F (SPS3F); FUNCTIONS IN: sucrose-phosphate synthase activity, transferase activity, transferring glycosyl groups; INVOLVED IN: biosynthetic process, sucrose metabolic process; LOCATED IN: cellular_component unknown; EXPRESSED IN: 9 plant structures; EXPRESSED DURING: LP.04 four leaves visible, 4 anthesis, C globular stage, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Sucrose-phosphate synthase (InterPro:IPR006380), Sucrose synthase (InterPro:IPR000368), Sucrose phosphate synthase, plant (InterPro:IPR012819), Glycosyl transferase, group 1 (InterPro:IPR001296); BEST Arabidopsis thaliana protein match is: sucrose phosphate synthase 1F (TAIR:AT5G20280.1); Has 8635 Blast hits to 8489 proteins in 1558 species: Archae - 393; Bacteria - 5603; Metazoa - 16; Fungi - 85; Plants - 793; Viruses - 0; Other Eukaryotes - 1745 (source: NCBI BLink).
Protein Annotations
CAZy:GT4EC:2.4.1.14eggNOG:COG0438eggNOG:KOG0853
EMBL:AC004809EMBL:AY078949EMBL:BT002210EMBL:CP002684
EnsemblPlants:AT1G04920EnsemblPlants:AT1G04920.1entrez:839382ExpressionAtlas:Q8RY24
GeneID:839382Genevisible:Q8RY24GO:GO:0005794GO:GO:0005986
GO:GO:0016157GO:GO:0046524Gramene:AT1G04920.1gramene_pathway:2.4.1.14
gramene_pathway:PWYQT-4467gramene_pathway:SUCSYN-PWYhmmpanther:PTHR12526hmmpanther:PTHR12526:SF360
HOGENOM:HOG000009685InParanoid:Q8RY24InterPro:IPR000368InterPro:IPR001296
InterPro:IPR006380InterPro:IPR012819iPTMnet:Q8RY24KEGG:00500+2.4.1.14
KEGG:ath:AT1G04920KO:K00696OMA:EMSAGNAPaxDb:Q8RY24
Pfam:PF00534Pfam:PF00862Pfam:PF05116Pfam:Q8RY24
PhylomeDB:Q8RY24PIR:F86182PRIDE:Q8RY24PRO:PR:Q8RY24
ProteinModelPortal:Q8RY24Proteomes:UP000006548RefSeq:NP_171984.2SMR:Q8RY24
STRING:3702.AT1G04920.1SUPFAM:SSF53756TAIR:AT1G04920tair10-symbols:ATSPS3F
tair10-symbols:SPS3FTIGRfam:TIGR02468TIGRFAMs:TIGR02468UniGene:At.42425
UniPathway:UPA00371UniProt:Q8RY24UniProt:W8PW44
Coordinates (TAIR10) chr1:-:1391674..1395756
Molecular Weight (calculated) 119483.00 Da
IEP (calculated) 6.22
GRAVY (calculated) -0.48
Length 1062 amino acids
Sequence (TAIR10)
(BLAST)
0001: MAGNEWINGY LEAILDSQAQ GIEETQQKPQ ASVNLREGDG QYFNPTKYFV EEVVTGVDET DLHRTWLKVV ATRNSRERNS RLENMCWRIW HLTRKKKQLE
0101: WEDSQRIANR RLEREQGRRD ATEDLSEDLS EGEKGDGLGE IVQPETPRRQ LQRNLSNLEI WSDDKKENRL YVVLISLHGL VRGENMELGS DSDTGGQVKY
0201: VVELARALAR MPGVYRVDLF TRQICSSEVD WSYAEPTEML TTAEDCDGDE TGESSGAYII RIPFGPRDKY LNKEILWPFV QEFVDGALAH ILNMSKVLGE
0301: QIGKGKPVWP YVIHGHYADA GDSAALLSGA LNVPMVLTGH SLGRNKLEQL LKQGRQSKED INSTYKIKRR IEAEELSLDA AELVITSTRQ EIDEQWGLYD
0401: GFDVKLEKVL RARARRGVNC HGRFMPRMAV IPPGMDFTNV EVQEDTPEGD GDLASLVGGT EGSSPKAVPT IWSEVMRFFT NPHKPMILAL SRPDPKKNIT
0501: TLLKAFGECR PLRELANLTL IMGNRDDIDE LSSGNASVLT TVLKLIDKYD LYGSVAYPKH HKQSDVPDIY RLAANTKGVF INPALVEPFG LTLIEAAAHG
0601: LPMVATKNGG PVDIHRALHN GLLVDPHDQE AIANALLKLV SEKNLWHECR INGWKNIHLF SWPEHCRTYL TRIAACRMRH PQWQTDADEV AAQDDEFSLN
0701: DSLKDVQDMS LRLSMDGDKP SLNGSLEPNS ADPVKQIMSR MRTPEIKSKP ELQGKKQSDN LGSKYPVLRR RERLVVLAVD CYDNEGAPDE KAMVPMIQNI
0801: IKAVRSDPQM AKNSGFAIST SMPLDELTRF LKSAKIQVSE FDTLICSSGS EVYYPGGEEG KLLPDPDYSS HIDYRWGMEG LKNTVWKLMN TTAVGGEARN
0901: KGSPSLIQED QASSNSHCVA YMIKDRSKVM RVDDLRQKLR LRGLRCHPMY CRNSTRMQIV PLLASRSQAL RYLFVRWRLN VANMYVVVGD RGDTDYEELI
1001: SGTHKTVIVK GLVTLGSDAL LRSTDLRDDI VPSESPFIGF LKVDSPVKEI TDIFKQLSKA TA
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)