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AT2G28420.1
Subcellular Consensus
(Prediction and Experimental)
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SUBAcon:
nucleus 0.964
What is SUBAcon?
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no PPI data
Description (TAIR10) protein_coding : Lactoylglutathione lyase / glyoxalase I family protein
Curator
Summary (TAIR10)
Computational
Description (TAIR10)
Lactoylglutathione lyase / glyoxalase I family protein; CONTAINS InterPro DOMAIN/s: Glyoxalase/bleomycin resistance protein/dioxygenase (InterPro:IPR004360); BEST Arabidopsis thaliana protein match is: Lactoylglutathione lyase / glyoxalase I family protein (TAIR:AT1G80160.1); Has 1054 Blast hits to 1054 proteins in 326 species: Archae - 2; Bacteria - 538; Metazoa - 105; Fungi - 6; Plants - 229; Viruses - 0; Other Eukaryotes - 174 (source: NCBI BLink).
Protein Annotations
eggNOG:ENOG410IWXCeggNOG:ENOG410YGZHEMBL:AC006283EMBL:CP002685
EnsemblPlants:AT2G28420EnsemblPlants:AT2G28420.1entrez:817390Gene3D:3.10.180.10
GeneID:817390GO:GO:0016829Gramene:AT2G28420.1hmmpanther:PTHR10374
hmmpanther:PTHR10374:SF10InterPro:IPR004360InterPro:IPR029068KEGG:ath:AT2G28420
ncoils:CoilOMA:DLDPMDNPfam:PF00903Pfam:PF12681
PhylomeDB:Q9SKM8PIR:F84684Proteomes:UP000006548RefSeq:NP_029429.1
STRING:3702.AT2G28420.1SUPFAM:SSF54593TAIR:AT2G28420UniGene:At.13736
UniProt:Q9SKM8
Coordinates (TAIR10) chr2:+:12157946..12158500
Molecular Weight (calculated) 21002.90 Da
IEP (calculated) 4.87
GRAVY (calculated) -0.63
Length 184 amino acids
Sequence (TAIR10)
(BLAST)
001: MEEKKKKGDD ELNSKPPLMA LNHVSRLCKD VKKSLEFYTK VLGFVEIERP ASFDFDGAWL FNYGVGIHLV QAKDQDKLPS DTDHLDPMDN HISFQCEDME
101: ALEKRLKEVK VKYIKRTVGD EKDAAIDQLF FNDPDGFMVE ICNCENLELV PCHSADAIRL PEDRHAPPVA LPDSSNRRMP QPNS
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)