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AT5G26000.1
Subcellular Consensus
(Prediction and Experimental)
min: heatmap :max

.
SUBAcon:
vacuole 1.000
What is SUBAcon?
Predictors External Curations
SwissProt : vacuole 16381842
TAIR : plastid 15028209
TAIR : vacuole 15539469
TAIR : plastid 18431481
TAIR : peroxisome 17951448
Experimental Localisations and PPI
FP MS/MS PPI
  • PMID:19880612 (2010): endoplasmic reticulum
  • PMID:19880612 (2010): plant-type vacuole plant-type vacuole membrane
  • PMID:31673584 (2019): extracellular region plant-type cell wall
  • PMID:31615849 (2019): plastid plastid thylakoid
  • PMID:30962257 (2019): plastid
  • PMID:30783145 (2019): extracellular region plant-type cell wall
  • PMID:30447334 (2019): plasma membrane
  • PMID:29104584 (2017): nucleus nuclear matrix nucleolus
  • PMID:28865150 (2017): extracellular region plant-type cell wall
  • PMID:28818374 (2017): extracellular region plant-type cell wall
  • PMID:28155257 (2017): extracellular region plant-type cell wall
  • PMID:27943495 (2017): mitochondrion
  • PMID:27137770 (2016): plastid plastid stroma
  • PMID:25641898 (2015): plasma membrane
  • PMID:24361574 (2014): plastid plastid stroma
  • PMID:24124904 (2013): plastid
  • PMID:23851315 (2013): plastid
  • PMID:23673981 (2013): plastid plastid stroma plastoglobules
  • PMID:23396599 (2013): nucleus nuclear envelope nuclear inner membrane
  • PMID:23390424 (2013): plastid plastid envelope
  • PMID:22363647 (2012): extracellular region apoplast
  • PMID:22215637 (2012): plasma membrane
  • PMID:21988472 (2012): plant-type vacuole plant-type vacuole membrane
  • PMID:20061580 (2010): plastid
  • PMID:19329564 (2009): peroxisome
  • PMID:17951448 (2007): peroxisome
  • PMID:16648217 (2006): plastid
  • PMID:15539469 (2004): plant-type vacuole
  • PMID:15028209 (2004): plastid
SUBAcon links
AGI-AGI relationships
Coexpression PPI
Description (TAIR10) protein_coding : thioglucoside glucohydrolase 1
Curator
Summary (TAIR10)
member of Glycoside Hydrolase Family 1. encodes one of two known functional myrosinase enzymes in Arabidopsis. The enzyme catalyzes the hydrolysis of glucosinolates into compounds that are toxic to various microbes and herbivores.
Computational
Description (TAIR10)
thioglucoside glucohydrolase 1 (TGG1); FUNCTIONS IN: thioglucosidase activity, beta-glucosidase activity, hydrolase activity, hydrolyzing O-glycosyl compounds; INVOLVED IN: glucosinolate catabolic process; LOCATED IN: in 7 components; EXPRESSED IN: 9 plant structures; EXPRESSED DURING: seedling growth; CONTAINS InterPro DOMAIN/s: Glycoside hydrolase, family 1 (InterPro:IPR001360), Glycoside hydrolase, family 1, active site (InterPro:IPR018120), Glycoside hydrolase, catalytic core (InterPro:IPR017853), Glycoside hydrolase, subgroup, catalytic core (InterPro:IPR013781); BEST Arabidopsis thaliana protein match is: glucoside glucohydrolase 2 (TAIR:AT5G25980.2); Has 11138 Blast hits to 10810 proteins in 1458 species: Archae - 132; Bacteria - 7708; Metazoa - 712; Fungi - 191; Plants - 1422; Viruses - 0; Other Eukaryotes - 973 (source: NCBI BLink).
Protein Annotations
BioCyc:ARA:GQT-1321-MONOMERBioCyc:MetaCyc:AT5G26000-MONOMERBioGrid:17944BRENDA:3.2.1.147
CAZy:GH1EC:3.2.1.147EC:3.2.1.21eggNOG:COG2723
eggNOG:KOG0626EMBL:AF083677EMBL:AF149413EMBL:AJ831440
EMBL:AJ831441EMBL:AJ831442EMBL:AJ831443EMBL:AJ831444
EMBL:AJ831445EMBL:AJ831446EMBL:AJ831447EMBL:AJ831448
EMBL:AJ831449EMBL:AJ831450EMBL:AJ831451EMBL:AJ831452
EMBL:AJ831453EMBL:AJ831454EMBL:AJ831455EMBL:AJ831456
EMBL:AJ831457EMBL:AJ831458EMBL:AJ831459EMBL:AJ831460
EMBL:AJ831461EMBL:AJ831462EMBL:AJ831463EMBL:AJ831464
EMBL:AJ831465EMBL:AJ831466EMBL:AJ831467EMBL:AK317589
EMBL:AY045681EMBL:AY054237EMBL:AY058182EMBL:AY090382
EMBL:CP002688EMBL:L11454EMBL:X79194EMBL:Z18232
EnsemblPlants:AT5G26000EnsemblPlants:AT5G26000.1entrez:832669Gene3D:3.20.20.80
GeneID:832669Genevisible:P37702GO:GO:0002213GO:GO:0005773
GO:GO:0005777GO:GO:0005975GO:GO:0008422GO:GO:0009505
GO:GO:0009507GO:GO:0009579GO:GO:0009625GO:GO:0009737
GO:GO:0009738GO:GO:0010119GO:GO:0019137GO:GO:0019762
GO:GO:0022626GO:GO:0046872GO:GO:0048046gramene_pathway:3.2.1.147
gramene_pathway:PWY-5267hmmpanther:PTHR10353hmmpanther:PTHR10353:SF49InParanoid:P37702
IntAct:P37702InterPro:IPR001360InterPro:IPR013781InterPro:IPR017853
InterPro:IPR018120InterPro:IPR033132iPTMnet:P37702KEGG:ath:AT5G26000
KO:K01237OMA:PDIMREYPANTHER:PTHR10353PaxDb:P37702
Pfam:P37702Pfam:PF00232PhylomeDB:P37702PIR:S56653
PRIDE:P37702PRINTS:PR00131PRO:PR:P37702PROSITE:PS00572
PROSITE:PS00653ProteinModelPortal:P37702Proteomes:UP000006548RefSeq:NP_197972.2
RefSeq:NP_851077.1SABIO-RK:P37702scanprosite:PS00572scanprosite:PS00653
SMR:P37702STRING:3702.AT5G26000.1SUPFAM:SSF51445SWISS-2DPAGE:P37702
TAIR:AT5G26000tair10-symbols:BGLU38tair10-symbols:TGG1UniGene:At.23592
UniGene:At.47944UniGene:At.73176UniProt:P37702
Coordinates (TAIR10) chr5:-:9079678..9082347
Molecular Weight (calculated) 61135.90 Da
IEP (calculated) 5.70
GRAVY (calculated) -0.40
Length 541 amino acids
Sequence (TAIR10)
(BLAST)
001: MKLLMLAFVF LLALATCKGD EFVCEENEPF TCNQTKLFNS GNFEKGFIFG VASSAYQVEG GRGRGLNVWD SFTHRFPEKG GADLGNGDTT CDSYTLWQKD
101: IDVMDELNST GYRFSIAWSR LLPKGKRSRG VNPGAIKYYN GLIDGLVAKN MTPFVTLFHW DLPQTLQDEY NGFLNKTIVD DFKDYADLCF ELFGDRVKNW
201: ITINQLYTVP TRGYALGTDA PGRCSPKIDV RCPGGNSSTE PYIVAHNQLL AHAAAVDVYR TKYKDDQKGM IGPVMITRWF LPFDHSQESK DATERAKIFF
301: HGWFMGPLTE GKYPDIMREY VGDRLPEFSE TEAALVKGSY DFLGLNYYVT QYAQNNQTIV PSDVHTALMD SRTTLTSKNA TGHAPGPPFN AASYYYPKGI
401: YYVMDYFKTT YGDPLIYVTE NGFSTPGDED FEKATADYKR IDYLCSHLCF LSKVIKEKNV NVKGYFAWSL GDNYEFCNGF TVRFGLSYVD FANITGDRDL
501: KASGKWFQKF INVTDEDSTN QDLLRSSVSS KNRDRKSLAD A
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)