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AT5G61740.1
Subcellular Consensus
(Prediction and Experimental)
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SUBAcon:
plasma membrane 1.000
What is SUBAcon?
Experimental Localisations and PPI
FP MS/MS PPI
  • PMID:31541795 (2020): plasma membrane
  • PMID:22318864 (2012): plasma membrane
  • PMID:21533090 (2011): extracellular region plant-type cell wall
  • PMID:21433285 (2011): plasma membrane
  • PMID:20374526 (2010): plasma membrane
  • PMID:17317660 (2007): plasma membrane
  • PMID:15308754 (2004): plasma membrane
  • PMID:14506206 (2003): plasma membrane
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no PPI data
Description (TAIR10) protein_coding : ABC2 homolog 14
Curator
Summary (TAIR10)
member of ATH subfamily
Computational
Description (TAIR10)
ABC2 homolog 14 (ATH14); FUNCTIONS IN: ATPase activity, coupled to transmembrane movement of substances, transporter activity; LOCATED IN: plasma membrane; EXPRESSED IN: 15 plant structures; EXPRESSED DURING: 7 growth stages; CONTAINS InterPro DOMAIN/s: ATPase, AAA+ type, core (InterPro:IPR003593), ABC transporter-like (InterPro:IPR003439), ABC transporter, conserved site (InterPro:IPR017871); BEST Arabidopsis thaliana protein match is: ABC2 homolog 16 (TAIR:AT5G61700.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).
Protein Annotations
EnsemblPlants:AT5G61740EnsemblPlants:AT5G61740.1entrez:836296ncoils:Coil
Pfam:PF00005Pfscan:PS50893scanprosite:PS00211tair10-symbols:ATATH14
tair10-symbols:ATH14TMHMM:TMhelix
Coordinates (TAIR10) chr5:+:24808484..24812597
Molecular Weight (calculated) 93921.50 Da
IEP (calculated) 8.25
GRAVY (calculated) -0.03
Length 848 amino acids
Sequence (TAIR10)
(BLAST)
001: MADPSQASFW AQANALLRKN LTYQAADLTK CGSQDDFSIG DCPIPNPPLL PPLLQIPEPE SRAVSGGFFS YNDLPDKSCR KTGTCPVTIL LTGNNHSLGQ
101: ALSGNMFGGS FAVNSSDLLS SLAYNVLGST LALGTNNYAD PGIESDFPIY SIQSQCSPNS TWPLSFGKIH TAVTCLQGLS LWRNNSVEVN DELFKGNWKG
201: NPERMTNEIA AAYDLLNTDR NNFDVTIWYN STNIDDPSRA PLVRVPRLLN LVSNAYLKFL KGPGTRILFE FVKEVPKHQT KFNLDIASML GPLFFTWVVL
301: LLFPVILTSL VYEKQERLRI IMKMHGLGIA IGLRYFRLND YSVQFIFYFI FVNLQISFAF LASSIFSKVK TATVVAYTLV FASGLLGMFL FGELLESPTF
401: PEKGILALEL YPGFSLFRGL YEFAQYASRG NGMKWKDLKE SGMDKLFYLM SVEWFVILIV AYSIDLLSSS GRSPFVFFKK SSSLPSPSVQ RQNSENVLID
501: MEKTDVTQER EKVEKLRKEG TTGHAIVCDN LKKVYPGSDG NPPKLAVRGL YLDVPSGECF GMLGPNGAGK TSFINMMTGL LKPTSGTALV QGLDICKDMN
601: KVYTSMGVCP QHDLLWGTLT GREHLLFYGR LKNIKGSALM QAVEESLKSV SLFDGGVADK PAGKYSGGMK RRLSVAISLI GNPKVVYMDE PSTGLDPASR
701: KDLWTVIQRA KQNTAIILTT HSMEEAEFLC DRLGIFVDGG LQCVGNPKEL KGRYGGSYVF TMTTSVEHEE KVERMVKHIS PNSKRVYHLA GTQKFEIPKQ
801: EVMIADVFFM VEKVKSKFTV FAWGLADTTL EDVFFKVATT AQAFNSLS
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)