AT5G61740.1
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Subcellular Consensus
(Prediction and Experimental) min:  :max.
SUBAcon:plasma membrane 1.000 What is SUBAcon? |
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| Experimental Localisations and PPI |
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SUBAcon links
AGI-AGI relationships |
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| Description (TAIR10) | protein_coding : ABC2 homolog 14 | ||||||||||||
| Curator Summary (TAIR10) |
member of ATH subfamily | ||||||||||||
| Computational Description (TAIR10) |
ABC2 homolog 14 (ATH14); FUNCTIONS IN: ATPase activity, coupled to transmembrane movement of substances, transporter activity; LOCATED IN: plasma membrane; EXPRESSED IN: 15 plant structures; EXPRESSED DURING: 7 growth stages; CONTAINS InterPro DOMAIN/s: ATPase, AAA+ type, core (InterPro:IPR003593), ABC transporter-like (InterPro:IPR003439), ABC transporter, conserved site (InterPro:IPR017871); BEST Arabidopsis thaliana protein match is: ABC2 homolog 16 (TAIR:AT5G61700.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). | ||||||||||||
| Protein Annotations |
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| Coordinates (TAIR10) | chr5:+:24808484..24812597 | ||||||||||||
| Molecular Weight (calculated) | 93921.50 Da | ||||||||||||
| IEP (calculated) | 8.25 | ||||||||||||
| GRAVY (calculated) | -0.03 | ||||||||||||
| Length | 848 amino acids | ||||||||||||
| Sequence (TAIR10) (BLAST) |
001: MADPSQASFW AQANALLRKN LTYQAADLTK CGSQDDFSIG DCPIPNPPLL PPLLQIPEPE SRAVSGGFFS YNDLPDKSCR KTGTCPVTIL LTGNNHSLGQ 101: ALSGNMFGGS FAVNSSDLLS SLAYNVLGST LALGTNNYAD PGIESDFPIY SIQSQCSPNS TWPLSFGKIH TAVTCLQGLS LWRNNSVEVN DELFKGNWKG 201: NPERMTNEIA AAYDLLNTDR NNFDVTIWYN STNIDDPSRA PLVRVPRLLN LVSNAYLKFL KGPGTRILFE FVKEVPKHQT KFNLDIASML GPLFFTWVVL 301: LLFPVILTSL VYEKQERLRI IMKMHGLGIA IGLRYFRLND YSVQFIFYFI FVNLQISFAF LASSIFSKVK TATVVAYTLV FASGLLGMFL FGELLESPTF 401: PEKGILALEL YPGFSLFRGL YEFAQYASRG NGMKWKDLKE SGMDKLFYLM SVEWFVILIV AYSIDLLSSS GRSPFVFFKK SSSLPSPSVQ RQNSENVLID 501: MEKTDVTQER EKVEKLRKEG TTGHAIVCDN LKKVYPGSDG NPPKLAVRGL YLDVPSGECF GMLGPNGAGK TSFINMMTGL LKPTSGTALV QGLDICKDMN 601: KVYTSMGVCP QHDLLWGTLT GREHLLFYGR LKNIKGSALM QAVEESLKSV SLFDGGVADK PAGKYSGGMK RRLSVAISLI GNPKVVYMDE PSTGLDPASR 701: KDLWTVIQRA KQNTAIILTT HSMEEAEFLC DRLGIFVDGG LQCVGNPKEL KGRYGGSYVF TMTTSVEHEE KVERMVKHIS PNSKRVYHLA GTQKFEIPKQ 801: EVMIADVFFM VEKVKSKFTV FAWGLADTTL EDVFFKVATT AQAFNSLS |
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| See Also |
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Citation
If you find this resource useful please cite one of the following publications:
Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)
Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)