suba logo
AT1G79640.1
Subcellular Consensus
(Prediction and Experimental)
min: heatmap :max

.
SUBAcon:
nucleus 1.000
What is SUBAcon?
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no PPI data
Description (TAIR10) protein_coding : Protein kinase superfamily protein
Curator
Summary (TAIR10)
Computational
Description (TAIR10)
Protein kinase superfamily protein; FUNCTIONS IN: protein serine/threonine kinase activity, protein kinase activity, kinase activity, ATP binding; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: cellular_component unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Protein kinase, catalytic domain (InterPro:IPR000719), Serine/threonine-protein kinase domain (InterPro:IPR002290), Tyrosine-protein kinase, catalytic domain (InterPro:IPR020635), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009); BEST Arabidopsis thaliana protein match is: Protein kinase superfamily protein (TAIR:AT5G14720.1); Has 121160 Blast hits to 119540 proteins in 3705 species: Archae - 140; Bacteria - 14014; Metazoa - 45302; Fungi - 11299; Plants - 30637; Viruses - 505; Other Eukaryotes - 19263 (source: NCBI BLink).
Protein Annotations
eggNOG:ENOG410XSWSeggNOG:KOG0582EMBL:CP002684EnsemblPlants:AT1G79640
EnsemblPlants:AT1G79640.1entrez:844303ExpressionAtlas:F4IF81GeneID:844303
GO:GO:0004674GO:GO:0005524Gramene:AT1G79640.1hmmpanther:PTHR24361
hmmpanther:PTHR24361:SF159InParanoid:F4IF81InterPro:IPR000719InterPro:IPR011009
InterPro:IPR017441iPTMnet:F4IF81ncoils:CoilOMA:SMQAISH
PaxDb:F4IF81Pfam:PF00069Pfscan:PS50011PRIDE:F4IF81
PROSITE:PS00107PROSITE:PS50011ProteinModelPortal:F4IF81Proteomes:UP000006548
RefSeq:NP_178082.6scanprosite:PS00107SMART:SM00220SMR:F4IF81
STRING:3702.AT1G79640.1SUPFAM:SSF56112TAIR:AT1G79640UniGene:At.47688
UniProt:F4IF81
Coordinates (TAIR10) chr1:-:29966913..29971387
Molecular Weight (calculated) 76306.30 Da
IEP (calculated) 6.05
GRAVY (calculated) -0.51
Length 687 amino acids
Sequence (TAIR10)
(BLAST)
001: MGTMEKKKYP IGPEHYTLYE FIGQGVSALV HRALCIPFDE VVAIKILDFE RDNCDLNNIS REAQTMMLVD HPNVLKSHCS FVSDHNLWVI MPYMSGGSCL
101: HILKAAYPDG FEEAIIATIL REALKGLDYL HQHGHIHRDV KAGNILLGAR GAVKLGDFGV SACLFDSGDR QRTRNTFVGT PCWMAPEVME QLHGYDFKAD
201: IWSFGITGLE LAHGHAPFSK YPPMKVLLMT LQNAPPGLDY ERDKKFSRSF KQMIASCLVK DPSKRPSAKK LLKHSFFKQA RSSDYIARKL LDGLPDLVNR
301: VQAIKRKEED MLAQEKMADG EKEELSQNEY KRGISGWNFN LDDMKAQASL IQDMDCGFSD SLSGSATSLQ ALDSQDTQSE IQEDTGQITN KYLQPLIHRS
401: LSIARDKSDD DSSLASPSYD SYVYSSPRHE DLSLNNTHVG STHANNGKPT DATSIPTNQP TEIIAGSSVL ADGNGAPNKG ESDKTQEQLQ NGSNCNGTHP
501: TVGGDDVPTE MAVKPPKAAS SLDESDDKSK PPVVQQRGRF KVTSENLDIE KVVAPSPILQ KSHSMQVLCQ HSSASLPHSD VTLPNLTSSY VYPLVYPVLQ
601: TNILERDNIL HMMKVLTNRE LTDGRAVEQG SIQQPTVPPT EKSMLEAAHE REKELLHDIT DLQWRLICAE EELQKYKTEH AQVSMSN
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)