AT1G79640.1
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Subcellular Consensus
(Prediction and Experimental) min:  :max.
SUBAcon:nucleus 1.000 What is SUBAcon? |
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| Experimental Localisations and PPI |
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SUBAcon links
AGI-AGI relationships |
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| Description (TAIR10) | protein_coding : Protein kinase superfamily protein | ||||||||||||||||||||||||||||||||||||||||
| Curator Summary (TAIR10) |
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| Computational Description (TAIR10) |
Protein kinase superfamily protein; FUNCTIONS IN: protein serine/threonine kinase activity, protein kinase activity, kinase activity, ATP binding; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: cellular_component unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Protein kinase, catalytic domain (InterPro:IPR000719), Serine/threonine-protein kinase domain (InterPro:IPR002290), Tyrosine-protein kinase, catalytic domain (InterPro:IPR020635), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009); BEST Arabidopsis thaliana protein match is: Protein kinase superfamily protein (TAIR:AT5G14720.1); Has 121160 Blast hits to 119540 proteins in 3705 species: Archae - 140; Bacteria - 14014; Metazoa - 45302; Fungi - 11299; Plants - 30637; Viruses - 505; Other Eukaryotes - 19263 (source: NCBI BLink). | ||||||||||||||||||||||||||||||||||||||||
| Protein Annotations |
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| Coordinates (TAIR10) | chr1:-:29966913..29971387 | ||||||||||||||||||||||||||||||||||||||||
| Molecular Weight (calculated) | 76306.30 Da | ||||||||||||||||||||||||||||||||||||||||
| IEP (calculated) | 6.05 | ||||||||||||||||||||||||||||||||||||||||
| GRAVY (calculated) | -0.51 | ||||||||||||||||||||||||||||||||||||||||
| Length | 687 amino acids | ||||||||||||||||||||||||||||||||||||||||
| Sequence (TAIR10) (BLAST) |
001: MGTMEKKKYP IGPEHYTLYE FIGQGVSALV HRALCIPFDE VVAIKILDFE RDNCDLNNIS REAQTMMLVD HPNVLKSHCS FVSDHNLWVI MPYMSGGSCL 101: HILKAAYPDG FEEAIIATIL REALKGLDYL HQHGHIHRDV KAGNILLGAR GAVKLGDFGV SACLFDSGDR QRTRNTFVGT PCWMAPEVME QLHGYDFKAD 201: IWSFGITGLE LAHGHAPFSK YPPMKVLLMT LQNAPPGLDY ERDKKFSRSF KQMIASCLVK DPSKRPSAKK LLKHSFFKQA RSSDYIARKL LDGLPDLVNR 301: VQAIKRKEED MLAQEKMADG EKEELSQNEY KRGISGWNFN LDDMKAQASL IQDMDCGFSD SLSGSATSLQ ALDSQDTQSE IQEDTGQITN KYLQPLIHRS 401: LSIARDKSDD DSSLASPSYD SYVYSSPRHE DLSLNNTHVG STHANNGKPT DATSIPTNQP TEIIAGSSVL ADGNGAPNKG ESDKTQEQLQ NGSNCNGTHP 501: TVGGDDVPTE MAVKPPKAAS SLDESDDKSK PPVVQQRGRF KVTSENLDIE KVVAPSPILQ KSHSMQVLCQ HSSASLPHSD VTLPNLTSSY VYPLVYPVLQ 601: TNILERDNIL HMMKVLTNRE LTDGRAVEQG SIQQPTVPPT EKSMLEAAHE REKELLHDIT DLQWRLICAE EELQKYKTEH AQVSMSN |
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| See Also |
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Citation
If you find this resource useful please cite one of the following publications:
Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)
Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)