AT1G03920.1
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Subcellular Consensus
(Prediction and Experimental) min:  :max.
SUBAcon:nucleus 0.782 What is SUBAcon? |
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| Experimental Localisations and PPI |
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SUBAcon links
AGI-AGI relationships |
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| Description (TAIR10) | protein_coding : Protein kinase family protein | ||||||||||||||||||||||||||||||||||||||||||||||||||||
| Curator Summary (TAIR10) |
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| Computational Description (TAIR10) |
Protein kinase family protein; FUNCTIONS IN: kinase activity; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: cytosol, plasma membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 11 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Serine/threonine-protein kinase domain (InterPro:IPR002290), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase, C-terminal (InterPro:IPR017892), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271), AGC-kinase, C-terminal (InterPro:IPR000961), Protein kinase, catalytic domain (InterPro:IPR000719), Tyrosine-protein kinase, catalytic domain (InterPro:IPR020635); BEST Arabidopsis thaliana protein match is: AGC (cAMP-dependent, cGMP-dependent and protein kinase C) kinase family protein (TAIR:AT2G20470.1); Has 109567 Blast hits to 108299 proteins in 4009 species: Archae - 130; Bacteria - 13646; Metazoa - 38992; Fungi - 11695; Plants - 26009; Viruses - 442; Other Eukaryotes - 18653 (source: NCBI BLink). | ||||||||||||||||||||||||||||||||||||||||||||||||||||
| Protein Annotations |
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| Coordinates (TAIR10) | chr1:+:1001473..1004240 | ||||||||||||||||||||||||||||||||||||||||||||||||||||
| Molecular Weight (calculated) | 65033.00 Da | ||||||||||||||||||||||||||||||||||||||||||||||||||||
| IEP (calculated) | 6.46 | ||||||||||||||||||||||||||||||||||||||||||||||||||||
| GRAVY (calculated) | -0.75 | ||||||||||||||||||||||||||||||||||||||||||||||||||||
| Length | 569 amino acids | ||||||||||||||||||||||||||||||||||||||||||||||||||||
| Sequence (TAIR10) (BLAST) |
001: MDSARSWFHK FQPRDKPRKK DMFSGSTYGG GVTETTVPDG GNDTETATKL PPLGGDGEAL SNSTKQKVAA AKQYIENHYK EQMKNLNERK ERRTTLEKKL 101: ADADVCEEDQ TNLMKFLEKK ETEYMRLQRH KMGADDFELL TMIGKGAFGE VRVVREINTG HVFAMKKLKK SEMLRRGQVE HVRAERNLLA EVDSNCIVKL 201: YCSFQDNEYL YLIMEYLPGG DMMTLLMRKD TLSEDEAKFY IAESVLAIES IHNRNYIHRD IKPDNLLLDR YGHLRLSDFG LCKPLDCSVI DGEDFTVGNA 301: GSGGGSESVS TTPKRSQQEQ LEHWQKNRRM LAYSTVGTPD YIAPEVLLKK GYGMECDWWS LGAIMYEMLV GYPPFYADDP MSTCRKIVNW KTHLKFPEES 401: RLSRGARDLI GKLLCSVNQR LGSTGASQIK AHPWFEGVQW EKIYQMEAAF IPEVNDDLDT QNFEKFDEED NQTQAPSRTG PWRKMLSSKD INFVGYTYKN 501: FEIVNDYQVP GIAELKKKES KSKRPSVKSL FESESDSSSS GSEQQTINRS YSNPTPRGME PNLRRLDSE |
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| See Also |
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Citation
If you find this resource useful please cite one of the following publications:
Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)
Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)