AT5G65530.1
Subcellular Consensus
(Prediction and Experimental) min: :max .
SUBAcon:nucleus 0.997 What is SUBAcon? |
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Experimental Localisations and PPI |
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SUBAcon links
AGI-AGI relationships |
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Description (TAIR10) | protein_coding : Protein kinase superfamily protein | ||||||||||||||||||||||||||||||||||||||||||||||||||||
Curator Summary (TAIR10) |
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Computational Description (TAIR10) |
Protein kinase superfamily protein; FUNCTIONS IN: protein serine/threonine kinase activity, protein kinase activity, kinase activity, ATP binding; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: cellular_component unknown; EXPRESSED IN: 16 plant structures; EXPRESSED DURING: 8 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Serine/threonine-protein kinase domain (InterPro:IPR002290), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Serine/threonine-protein kinase, active site (InterPro:IPR008271), Protein kinase-like domain (InterPro:IPR011009), Protein kinase, catalytic domain (InterPro:IPR000719), Tyrosine-protein kinase, catalytic domain (InterPro:IPR020635); BEST Arabidopsis thaliana protein match is: ROP binding protein kinases 1 (TAIR:AT5G10520.1); Has 113031 Blast hits to 111947 proteins in 4379 species: Archae - 102; Bacteria - 12808; Metazoa - 41761; Fungi - 9419; Plants - 32365; Viruses - 431; Other Eukaryotes - 16145 (source: NCBI BLink). | ||||||||||||||||||||||||||||||||||||||||||||||||||||
Protein Annotations |
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Coordinates (TAIR10) | chr5:-:26190844..26192826 | ||||||||||||||||||||||||||||||||||||||||||||||||||||
Molecular Weight (calculated) | 51553.30 Da | ||||||||||||||||||||||||||||||||||||||||||||||||||||
IEP (calculated) | 5.93 | ||||||||||||||||||||||||||||||||||||||||||||||||||||
GRAVY (calculated) | -0.44 | ||||||||||||||||||||||||||||||||||||||||||||||||||||
Length | 456 amino acids | ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sequence (TAIR10) (BLAST) |
001: MAVEEMEKKI KGSQETELHK NDLSIEDPSP RCVLEIPVMS SDSDNSSSCS SCSPDKSSSP LSTTPPNVSS FHQWNKMIES IKKKSIRRFS VIPLLASYEL 101: TRKKKQPKLS PCSENDFDCD QILVAKPSWR NFTFDELVAA TDNFNPENMI GKGGHAEVYK GVLPDGETVA IKKLTRHAKE VEERVSDFLS ELGIIAHVNH 201: PNAARLRGFS CDRGLHFVLE YSSHGSLASL LFGSEECLDW KKRYKVAMGI ADGLSYLHND CPRRIIHRDI KASNILLSQD YEAQISDFGL AKWLPEHWPH 301: HIVFPIEGTF GYLAPEYFMH GIVDEKTDVF AFGVLLLEII TGRRAVDTDS RQSIVMWAKP LLEKNNMEEI VDPQLGNDFD ETEMKRVMQT ASMCIHHVST 401: MRPDMNRLVQ LLRGDDQLAE QKPGGARTVS LDDCDLDHTS SSYLNDLTRH RQLLME |
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See Also |
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Citation
If you find this resource useful please cite one of the following publications:
Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)
Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)