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AT5G65530.1
Subcellular Consensus
(Prediction and Experimental)
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SUBAcon:
nucleus 0.997
What is SUBAcon?
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no PPI data
Description (TAIR10) protein_coding : Protein kinase superfamily protein
Curator
Summary (TAIR10)
Computational
Description (TAIR10)
Protein kinase superfamily protein; FUNCTIONS IN: protein serine/threonine kinase activity, protein kinase activity, kinase activity, ATP binding; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: cellular_component unknown; EXPRESSED IN: 16 plant structures; EXPRESSED DURING: 8 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Serine/threonine-protein kinase domain (InterPro:IPR002290), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Serine/threonine-protein kinase, active site (InterPro:IPR008271), Protein kinase-like domain (InterPro:IPR011009), Protein kinase, catalytic domain (InterPro:IPR000719), Tyrosine-protein kinase, catalytic domain (InterPro:IPR020635); BEST Arabidopsis thaliana protein match is: ROP binding protein kinases 1 (TAIR:AT5G10520.1); Has 113031 Blast hits to 111947 proteins in 4379 species: Archae - 102; Bacteria - 12808; Metazoa - 41761; Fungi - 9419; Plants - 32365; Viruses - 431; Other Eukaryotes - 16145 (source: NCBI BLink).
Protein Annotations
eggNOG:COG0515eggNOG:KOG1187EMBL:CP002688EnsemblPlants:AT5G65530
EnsemblPlants:AT5G65530.1entrez:836679Gene3D:2.60.120.200GeneID:836679
GO:GO:0004674GO:GO:0005524GO:GO:0005654GO:GO:0010091
GO:GO:0046777GO:GO:0050832GO:GO:0071944Gramene:AT5G65530.1
hmmpanther:PTHR27001hmmpanther:PTHR27001:SF105InParanoid:F4KI00InterPro:IPR000719
InterPro:IPR008271InterPro:IPR011009InterPro:IPR013320InterPro:IPR017441
iPTMnet:F4KI00KEGG:ath:AT5G65530ncoils:CoilOMA:LNRHMQL
PaxDb:F4KI00Pfam:PF00069Pfam:PF07714Pfscan:PS50011
PRIDE:F4KI00PROSITE:PS00107PROSITE:PS00108PROSITE:PS50011
ProteinModelPortal:F4KI00Proteomes:UP000006548RefSeq:NP_201356.2scanprosite:PS00107
scanprosite:PS00108SMART:SM00220SMR:F4KI00STRING:3702.AT5G65530.1
SUPFAM:SSF56112TAIR:AT5G65530UniGene:At.28906UniGene:At.43470
UniProt:F4KI00
Coordinates (TAIR10) chr5:-:26190844..26192826
Molecular Weight (calculated) 51553.30 Da
IEP (calculated) 5.93
GRAVY (calculated) -0.44
Length 456 amino acids
Sequence (TAIR10)
(BLAST)
001: MAVEEMEKKI KGSQETELHK NDLSIEDPSP RCVLEIPVMS SDSDNSSSCS SCSPDKSSSP LSTTPPNVSS FHQWNKMIES IKKKSIRRFS VIPLLASYEL
101: TRKKKQPKLS PCSENDFDCD QILVAKPSWR NFTFDELVAA TDNFNPENMI GKGGHAEVYK GVLPDGETVA IKKLTRHAKE VEERVSDFLS ELGIIAHVNH
201: PNAARLRGFS CDRGLHFVLE YSSHGSLASL LFGSEECLDW KKRYKVAMGI ADGLSYLHND CPRRIIHRDI KASNILLSQD YEAQISDFGL AKWLPEHWPH
301: HIVFPIEGTF GYLAPEYFMH GIVDEKTDVF AFGVLLLEII TGRRAVDTDS RQSIVMWAKP LLEKNNMEEI VDPQLGNDFD ETEMKRVMQT ASMCIHHVST
401: MRPDMNRLVQ LLRGDDQLAE QKPGGARTVS LDDCDLDHTS SSYLNDLTRH RQLLME
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)