AT1G77320.2
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Subcellular Consensus
(Prediction and Experimental) min:  :max.
SUBAcon:nucleus 0.998 What is SUBAcon? |
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| Experimental Localisations and PPI |
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SUBAcon links
AGI-AGI relationships |
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| Description (TAIR10) | protein_coding : transcription coactivators | ||||||||||||||||||||||||||||||||
| Curator Summary (TAIR10) |
Mutant is defective in meiosis and produces abnormal microspores. Encodes a BRCT-domain-containing protein that could be specific to the meiotic cell cycle and that plays a crucial role in some DNA repair events independent of SPO11 DSB recombination repair. | ||||||||||||||||||||||||||||||||
| Computational Description (TAIR10) |
meiosis defective 1 (MEI1); FUNCTIONS IN: transcription coactivator activity; INVOLVED IN: female meiosis, reciprocal meiotic recombination, response to DNA damage stimulus, male meiosis; LOCATED IN: intracellular; CONTAINS InterPro DOMAIN/s: BRCT (InterPro:IPR001357). | ||||||||||||||||||||||||||||||||
| Protein Annotations |
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| Coordinates (TAIR10) | chr1:+:29056740..29062710 | ||||||||||||||||||||||||||||||||
| Molecular Weight (calculated) | 106323.00 Da | ||||||||||||||||||||||||||||||||
| IEP (calculated) | 7.26 | ||||||||||||||||||||||||||||||||
| GRAVY (calculated) | -0.48 | ||||||||||||||||||||||||||||||||
| Length | 955 amino acids | ||||||||||||||||||||||||||||||||
| Sequence (TAIR10) (BLAST) |
001: MKTTQLFKGA NVFMSRNLVP PEVFDTLLDA FKLNGAEIFL CCDPSRSGPS DFHEKFKDLK AKGCNLIGPQ CALFCAKEGR PLPQRGFTCC LAMDGLKVLA 101: SGFLVDEKVK IKELVTSMGG VLLSRASSDV NFVIVKNVLA AKYKWALNKK PIVTLNWLHR CWNEHRVVPQ EPYKIPPFSG LTICVTRIPA DERKGMEKVI 201: SEYGGSYSAE LTKSCDKYKV ARKWGHIQIV TRKWFQQSID KKVCLNEESY PVLGSIPLTR GVRDLGVHNG LEKFPSAATA SAADSYVSCA QSRDSDIEAS 301: ASQNVFPTSM NPSTDVKEPG GGPTARPQEQ NIDGCTARDS ESEDNDLYLS DCRIFLLGFE ASEMRKLAKL VRRGGGSRYM LLNERMTHIV VGTPSESEKR 401: EARSVAASGV IQVVIPSWLE DCDREKKEIP VHNIYTANHL ILPRDSACLT KGSFARMSSM EQTKNTHDQT MVYDSSSRSI NVSNGPATLL GKNKEAMQEF 501: GRKDEIHTGR KIVSPTQKET LISLVTCESK EQRSIQCEFS GQNDQERKSS VFKGETFCFS HSFPEDRRPQ IVEWVNQGGG EVVNDPLINN AHFTIECHGG 601: FQSTETTQTI YVSSHWVRNC LKVGCLLAVS SHILYSPLPC QTPLPGFESL CICSSQHNEK NVELLRNLSV VLGADFVERL TRKVTHLICN FAKGDKYVRA 701: SKWGIISVTP DWLYECVRQN QVVCTDNFHP RELTTQDREA GSQFHTQFVP MASRDSMSLP VSHSEDREKI QSFAGKSGCG KGEVYNRLGE IGKEQTFPSK 801: KAKLLRDGQE SDVFPVRELP SNCDRPSHSG DGIVTGYDVA SGREVPDVAD TIEDLLEQTS KIQDQKSPGR ILEKTHFSTS EQYNTGNHSV TGLSRHWINR 901: VHKNDDMGSP PGDATTDTYG NFSETQTESQ VVGYEEDLSG RQMLIDRVRT RSSLT |
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| See Also |
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Citation
If you find this resource useful please cite one of the following publications:
Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)
Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)