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AT5G50180.1
Subcellular Consensus
(Prediction and Experimental)

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SUBAcon:
cytosol 0.984
What is SUBAcon?
What is ASURE?
SUBAcon computations
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
Description (TAIR10) protein_coding : Protein kinase superfamily protein
Curator
Summary (TAIR10)
Computational
Description (TAIR10)
Protein kinase superfamily protein; FUNCTIONS IN: protein serine/threonine/tyrosine kinase activity, kinase activity; INVOLVED IN: protein amino acid phosphorylation; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Protein kinase, catalytic domain (InterPro:IPR000719), Serine/threonine-protein kinase, ATN1-like (InterPro:IPR015784), Serine-threonine/tyrosine-protein kinase (InterPro:IPR001245), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: Protein kinase superfamily protein (TAIR:AT5G40540.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).
Protein Annotations
BioCyc:ARA:AT5G50180-MONOMEReggNOG:COG0515eggNOG:KOG0192EMBL:AB024031EMBL:AK227958EMBL:BT004621EMBL:CP002688
EnsemblPlants:AT5G50180EnsemblPlants:AT5G50180.1entrez:835083GeneID:835083GO:GO:0004674GO:GO:0004712GO:GO:0005524
Gramene:AT5G50180.1hmmpanther:PTHR23257hmmpanther:PTHR23257:SF473HOGENOM:HOG000233857IntAct:Q9FGS7InterPro:IPR000719InterPro:IPR001245
InterPro:IPR008271InterPro:IPR011009InterPro:IPR017441KEGG:ath:AT5G50180OMA:KHLFVGPPfam:PF07714Pfscan:PS50011
PhylomeDB:Q9FGS7PRINTS:PR00109PROSITE:PS00107PROSITE:PS00108PROSITE:PS50011Proteomes:UP000006548RefSeq:NP_199829.1
scanprosite:PS00107scanprosite:PS00108SMART:SM00220SMR:Q9FGS7STRING:3702.AT5G50180.1SUPFAM:SSF56112TAIR:AT5G50180
UniGene:At.29747UniProt:Q9FGS7
Coordinates (TAIR10) chr5:+:20431116..20432883
Molecular Weight (calculated) 38971.30 Da
IEP (calculated) 8.08
GRAVY (calculated) -0.25
Length 346 amino acids
Sequence (TAIR10)
(BLAST)
001: MDSLTGFRME PKWQIDPQLL FVGPKIGEGA HAKVYEGKYK NQTVAIKIVH RGETPEEIAK RDSRFLREVE MLSRVQHKNL VKFIGACKEP VMVIVTELLQ
101: GGTLRKYLLN LRPACLETRV AIGFALDIAR GMECLHSHGI IHRDLKPENL LLTADHKTVK LADFGLAREE SLTEMMTAET GTYRWMAPEL YSTVTLRLGE
201: KKHYNHKVDA YSFAIVLWEL LHNKLPFEGM SNLQAAYAAA FKNVRPSAES LPEELGDIVT SCWNEDPNAR PNFTHIIELL LNYLSKVGSP ISAIPQRILA
301: SKNTLLPPDS PGTSSLMAKL DECGETPKAK SEDKRKGLFF CFNQCY
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)