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AT4G18700.1
Subcellular Consensus
(Prediction and Experimental)
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SUBAcon:
cytosol 0.523
What is SUBAcon?
Experimental Localisations and PPI
FP MS/MS PPI
  • PMID:30447334 (2019): plasma membrane
  • PMID:28865150 (2017): extracellular region plant-type cell wall
SUBAcon links
AGI-AGI relationships
Coexpression PPI
Description (TAIR10) protein_coding : CBL-interacting protein kinase 12
Curator
Summary (TAIR10)
Encodes CBL-interacting protein kinase 12 (CIPK12).
Computational
Description (TAIR10)
CBL-interacting protein kinase 12 (CIPK12); FUNCTIONS IN: protein serine/threonine kinase activity, protein kinase activity, kinase activity, ATP binding; INVOLVED IN: signal transduction, protein amino acid phosphorylation; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Serine/threonine-protein kinase domain (InterPro:IPR002290), NAF/FISL domain (InterPro:IPR018451), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271), NAF domain (InterPro:IPR004041), CBL-interacting protein kinase (InterPro:IPR020660), Protein kinase, catalytic domain (InterPro:IPR000719), Calcium/calmodulin-dependent protein kinase-like (InterPro:IPR020636); BEST Arabidopsis thaliana protein match is: CBL-interacting protein kinase 19 (TAIR:AT5G45810.1); Has 132740 Blast hits to 130588 proteins in 4556 species: Archae - 205; Bacteria - 15732; Metazoa - 48597; Fungi - 13262; Plants - 32355; Viruses - 523; Other Eukaryotes - 22066 (source: NCBI BLink).
Protein Annotations
BioCyc:ARA:AT4G18700-MONOMERBioGrid:12897DNASU:827604EC:2.7.11.1
eggNOG:COG0515eggNOG:KOG0583EMBL:AF295667EMBL:AF339149
EMBL:AL035526EMBL:AL161549EMBL:AY059819EMBL:BT001170
EMBL:CP002687EnsemblPlants:AT4G18700EnsemblPlants:AT4G18700.1entrez:827604
GeneID:827604Genevisible:Q9SN43GO:GO:0004674GO:GO:0005524
GO:GO:0007165Gramene:AT4G18700.1hmmpanther:PTHR24347hmmpanther:PTHR24347:SF168
HOGENOM:HOG000233016InParanoid:Q9SN43IntAct:Q9SN43InterPro:IPR000719
InterPro:IPR004041InterPro:IPR008271InterPro:IPR011009InterPro:IPR017441
InterPro:IPR018451InterPro:IPR020636KEGG:04150+2.7.11.1KEGG:04151+2.7.11.1
KEGG:ath:AT4G18700OMA:AEPMQTIPANTHER:PTHR24347PaxDb:Q9SN43
Pfam:PF00069Pfam:PF03822Pfam:Q9SN43Pfscan:PS50011
Pfscan:PS50816PhylomeDB:Q9SN43PIR:T04862PRIDE:Q9SN43
PRO:PR:Q9SN43PROSITE:PS00107PROSITE:PS00108PROSITE:PS50011
PROSITE:PS50816ProteinModelPortal:Q9SN43Proteomes:UP000006548RefSeq:NP_193605.1
scanprosite:PS00107scanprosite:PS00108SMART:SM00220SMR:Q9SN43
STRING:3702.AT4G18700.1SUPFAM:SSF56112TAIR:AT4G18700tair10-symbols:ATWL4
tair10-symbols:CIPK12tair10-symbols:SnRK3.9tair10-symbols:WL4TMHMM:TMhelix
UniGene:At.2691UniProt:Q9SN43
Coordinates (TAIR10) chr4:-:10289110..10290579
Molecular Weight (calculated) 55020.20 Da
IEP (calculated) 7.50
GRAVY (calculated) -0.25
Length 489 amino acids
Sequence (TAIR10)
(BLAST)
001: MAEKITRETS LPKERSSPQA LILGRYEMGK LLGHGTFAKV YLARNVKTNE SVAIKVIDKE KVLKGGLIAH IKREISILRR VRHPNIVQLF EVMATKAKIY
101: FVMEYVRGGE LFNKVAKGRL KEEVARKYFQ QLISAVTFCH ARGVYHRDLK PENLLLDENG NLKVSDFGLS AVSDQIRQDG LFHTFCGTPA YVAPEVLARK
201: GYDAAKVDIW SCGVILFVLM AGYLPFHDRN VMAMYKKIYR GEFRCPRWFS TELTRLLSKL LETNPEKRFT FPEIMENSWF KKGFKHIKFY VEDDKLCNVV
301: DDDELESDSV ESDRDSAASE SEIEYLEPRR RVGGLPRPAS LNAFDIISFS QGFDLSGLFD DDGEGSRFVS GAPVSKIISK LEEIAKVVSF TVRKKDCRVS
401: LEGSRQGVKG PLTIAAEIFE LTPSLVVVEV KKKGGDKTEY EDFCNNELKP KLQNLTADDV VAEPVAVSAV DETAIPNSPT ISFLPSDTE
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)