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AT3G53680.1
Subcellular Consensus
(Prediction and Experimental)

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SUBAcon:
nucleus 1.000
ASURE: nucleus
What is SUBAcon?
What is ASURE?
SUBAcon computations
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no PPI data
Description (TAIR10) protein_coding : Acyl-CoA N-acyltransferase with RING/FYVE/PHD-type zinc finger domain
Curator
Summary (TAIR10)
Computational
Description (TAIR10)
Acyl-CoA N-acyltransferase with RING/FYVE/PHD-type zinc finger domain; FUNCTIONS IN: DNA binding, zinc ion binding; INVOLVED IN: regulation of transcription, DNA-dependent; LOCATED IN: nucleus; EXPRESSED IN: 15 plant structures; EXPRESSED DURING: 6 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, PHD-type, conserved site (InterPro:IPR019786), Zinc finger, PHD-type (InterPro:IPR001965), Zinc finger, FYVE/PHD-type (InterPro:IPR011011), Acyl-CoA N-acyltransferase (InterPro:IPR016181), Zinc finger, PHD-finger (InterPro:IPR019787); BEST Arabidopsis thaliana protein match is: Acyl-CoA N-acyltransferase with RING/FYVE/PHD-type zinc finger domain (TAIR:AT2G37520.1); Has 3364 Blast hits to 2813 proteins in 199 species: Archae - 0; Bacteria - 0; Metazoa - 2189; Fungi - 239; Plants - 706; Viruses - 0; Other Eukaryotes - 230 (source: NCBI BLink).
Protein Annotations
eggNOG:ENOG410IVP0eggNOG:ENOG410Y9P5EMBL:AB493649EMBL:CP002686EnsemblPlants:AT3G53680EnsemblPlants:AT3G53680.1entrez:824535
Gene3D:3.30.40.10Gene3D:3.40.630.30GeneID:824535GO:GO:0008270GO:GO:0016746Gramene:AT3G53680.1hmmpanther:PTHR24098
hmmpanther:PTHR24098:SF12HOGENOM:HOG000242091InterPro:IPR001965InterPro:IPR011011InterPro:IPR013083InterPro:IPR016181InterPro:IPR019786
InterPro:IPR019787InterPro:IPR032308KEGG:ath:AT3G53680OMA:TIFRECFPfam:PF00628Pfam:PF16135Pfscan:PS50016
PROSITE:PS01359PROSITE:PS50016Proteomes:UP000006548RefSeq:NP_190936.2scanprosite:PS01359SMART:SM00249SUPFAM:SSF55729
SUPFAM:SSF57903TAIR:AT3G53680UniGene:At.53922UniProt:C0SVE6
Coordinates (TAIR10) chr3:-:19892863..19897412
Molecular Weight (calculated) 93281.80 Da
IEP (calculated) 7.14
GRAVY (calculated) -0.40
Length 841 amino acids
Sequence (TAIR10)
(BLAST)
001: MGEATVCFAK ENSETKKDLK RDRLCFEQDN LDEEELYSSN KRQTKEPSND DMKSEISNPV PSPVVDNASS FRDITSNPAK SSSGDRVGSC SGSYETITDE
101: KHSEYCSSLA NSDAVPSSFE REIPKHLSTT GITKITFKLS KRNEDFCDLP MIQEHTWEGY PSNVASSTLG VKMLKKIDST NFLSNVKKLL GTGILDGARV
201: KYLSTSAARE LQGIIHSGGY LCGCTACDFS KVLGAYEFER HAGGKTKHPN NHIYLENGRP VYNVIQELRI APPDVLEEVI RKVAGSALSE EGFQAWKGSF
301: QQDKNMTEDD SNHIMDHSFQ SLVSYPGSGW SLDESQSSTP CFPEDNYFRE KICTKDTRHA HKPKAKKLTS HMFGMGCHKK VSGGGKWKRD NDLHRLLFLP
401: NGLPDGTELA YYVKSQKLLQ GYKQGSGIVC SCCDTKISPS QFEAHAGMAG RRQPYRRIHI SSGLSLHDIA VSLADGGHVI TTGDSDDMCS ICGNGGDLLL
501: CAGCPQAFHT ACLKFQSMPE GTWYCSSCND GPTSCKIATA SDPNLKPIVI RLTRVVKAPE SEIGGCVFCR SHDFSIGKFD DRTVILCDQC EKEYHVGCLR
601: ENELCDLKGI PQDKWFCCSD CSRIHRVLQS SASCGPQTIP TLLLDTISRK YREKGIYIDN GNTVEWRMLS GKSRYPEHLP LLSRAATIFR ECFDPIVAKS
701: GRDLIPVMVY GRNISGQEFG GMYCLVLMVN SLVVSAALLR IFGQKVAELP IVATSREYQG RGYFQGLFAC VENLLSSLNV ENLLLPAAEE AESIWTNKFG
801: FTKMTEHRLQ RYQREVQLTI FKGTSMLEKK VPSFSESTSI I
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)