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AT3G23150.1
Subcellular Consensus
(Prediction and Experimental)
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SUBAcon:
plasma membrane 0.934
What is SUBAcon?
Experimental Localisations and PPI
FP MS/MS PPI
  • PMID:24134884 (2013): cytoskeleton microtubules
  • PMID:22574745 (2012): mitochondrion
SUBAcon links
AGI-AGI relationships
Coexpression PPI
Description (TAIR10) protein_coding : Signal transduction histidine kinase, hybrid-type, ethylene sensor
Curator
Summary (TAIR10)
Involved in ethylene perception in Arabidopsis
Computational
Description (TAIR10)
ethylene response 2 (ETR2); FUNCTIONS IN: ethylene binding, protein histidine kinase activity, receptor activity, glycogen synthase kinase 3 activity; INVOLVED IN: negative regulation of ethylene mediated signaling pathway; LOCATED IN: endomembrane system, endoplasmic reticulum membrane, membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 7 growth stages; CONTAINS InterPro DOMAIN/s: Signal transduction histidine kinase, homodimeric (InterPro:IPR009082), CheY-like (InterPro:IPR011006), Signal transduction histidine kinase, hybrid-type, ethylene sensor (InterPro:IPR014525), Signal transduction response regulator, receiver domain (InterPro:IPR001789), Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor domain (InterPro:IPR003661), GAF (InterPro:IPR003018); BEST Arabidopsis thaliana protein match is: Signal transduction histidine kinase, hybrid-type, ethylene sensor (TAIR:AT3G04580.2); Has 29902 Blast hits to 25922 proteins in 2098 species: Archae - 92; Bacteria - 25510; Metazoa - 11; Fungi - 1191; Plants - 1553; Viruses - 6; Other Eukaryotes - 1539 (source: NCBI BLink).
Protein Annotations
BioCyc:ARA:AT3G23150-MONOMERBioGrid:7223EC:2.7.11.-eggNOG:COG0642
eggNOG:KOG0519EMBL:AB025608EMBL:AF047975EMBL:AK229010
EMBL:CP002686EnsemblPlants:AT3G23150EnsemblPlants:AT3G23150.1entrez:821891
Gene3D:3.30.450.40GeneID:821891Genevisible:Q0WPQ2GO:GO:0000155
GO:GO:0004674GO:GO:0004872GO:GO:0005524GO:GO:0005783
GO:GO:0005789GO:GO:0006468GO:GO:0010105GO:GO:0016021
GO:GO:0038199GO:GO:0046872GO:GO:0051740Gramene:AT3G23150.1
hmmpanther:PTHR24423hmmpanther:PTHR24423:SF530HOGENOM:HOG000240343InParanoid:Q0WPQ2
IntAct:Q0WPQ2InterPro:IPR001789InterPro:IPR003018InterPro:IPR003661
InterPro:IPR011006InterPro:IPR014525InterPro:IPR029016iPTMnet:Q0WPQ2
KEGG:ath:AT3G23150KO:K14509ncoils:CoilOMA:VYIRFEM
PaxDb:Q0WPQ2Pfam:PF00072Pfam:PF01590Pfam:Q0WPQ2
Pfscan:PS50110PIRSF:PIRSF026389PRIDE:Q0WPQ2PRO:PR:Q0WPQ2
PROSITE:PS50110ProteinModelPortal:Q0WPQ2Proteomes:UP000006548RefSeq:NP_188956.1
SMART:SM00065SMART:SM00388SMART:SM00448SMR:Q0WPQ2
STRING:3702.AT3G23150.1SUPFAM:SSF47384SUPFAM:SSF52172SUPFAM:SSF55781
TAIR:AT3G23150tair10-symbols:ETR2TMHMM:TMhelixUniGene:At.43502
UniProt:Q0WPQ2
Coordinates (TAIR10) chr3:+:8255156..8257560
Molecular Weight (calculated) 85618.10 Da
IEP (calculated) 6.64
GRAVY (calculated) 0.03
Length 773 amino acids
Sequence (TAIR10)
(BLAST)
001: MVKEIASWLL ILSMVVFVSP VLAINGGGYP RCNCEDEGNS FWSTENILET QRVSDFLIAV AYFSIPIELL YFVSCSNVPF KWVLFEFIAF IVLCGMTHLL
101: HGWTYSAHPF RLMMAFTVFK MLTALVSCAT AITLITLIPL LLKVKVREFM LKKKAHELGR EVGLILIKKE TGFHVRMLTQ EIRKSLDRHT ILYTTLVELS
201: KTLGLQNCAV WMPNDGGTEM DLTHELRGRG GYGGCSVSME DLDVVRIRES DEVNVLSVDS SIARASGGGG DVSEIGAVAA IRMPMLRVSD FNGELSYAIL
301: VCVLPGGTPR DWTYQEIEIV KVVADQVTVA LDHAAVLEES QLMREKLAEQ NRALQMAKRD ALRASQARNA FQKTMSEGMR RPMHSILGLL SMIQDEKLSD
401: EQKMIVDTMV KTGNVMSNLV GDSMDVPDGR FGTEMKPFSL HRTIHEAACM ARCLCLCNGI RFLVDAEKSL PDNVVGDERR VFQVILHIVG SLVKPRKRQE
501: GSSLMFKVLK ERGSLDRSDH RWAAWRSPAS SADGDVYIRF EMNVENDDSS SQSFASVSSR DQEVGDVRFS GGYGLGQDLS FGVCKKVVQL IHGNISVVPG
601: SDGSPETMSL LLRFRRRPSI SVHGSSESPA PDHHAHPHSN SLLRGLQVLL VDTNDSNRAV TRKLLEKLGC DVTAVSSGFD CLTAIAPGSS SPSTSFQVVV
701: LDLQMAEMDG YEVAMRIRSR SWPLIVATTV SLDEEMWDKC AQIGINGVVR KPVVLRAMES ELRRVLLQAD QLL
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)