AT2G47390.1
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Subcellular Consensus
(Prediction and Experimental) min:  :max.
SUBAcon:plastid 1.000 What is SUBAcon? |
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| Experimental Localisations and PPI |
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SUBAcon links
AGI-AGI relationships |
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| Description (TAIR10) | protein_coding : Prolyl oligopeptidase family protein | ||||||||||||||||||||||||||||||||||||||||||||||||
| Curator Summary (TAIR10) |
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| Computational Description (TAIR10) |
Prolyl oligopeptidase family protein; FUNCTIONS IN: serine-type peptidase activity, serine-type endopeptidase activity; INVOLVED IN: proteolysis; LOCATED IN: chloroplast stroma, chloroplast; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Peptidase S9, prolyl oligopeptidase, catalytic domain (InterPro:IPR001375), Peptidase S9A, oligopeptidase, N-terminal beta-propeller (InterPro:IPR004106); BEST Arabidopsis thaliana protein match is: acylaminoacyl-peptidase-related (TAIR:AT4G14570.1); Has 4880 Blast hits to 4877 proteins in 846 species: Archae - 179; Bacteria - 3027; Metazoa - 477; Fungi - 49; Plants - 145; Viruses - 0; Other Eukaryotes - 1003 (source: NCBI BLink). | ||||||||||||||||||||||||||||||||||||||||||||||||
| Protein Annotations |
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| Coordinates (TAIR10) | chr2:-:19442278..19446253 | ||||||||||||||||||||||||||||||||||||||||||||||||
| Molecular Weight (calculated) | 106272.00 Da | ||||||||||||||||||||||||||||||||||||||||||||||||
| IEP (calculated) | 6.36 | ||||||||||||||||||||||||||||||||||||||||||||||||
| GRAVY (calculated) | -0.39 | ||||||||||||||||||||||||||||||||||||||||||||||||
| Length | 961 amino acids | ||||||||||||||||||||||||||||||||||||||||||||||||
| Sequence (TAIR10) (BLAST) |
001: MMRFHKACHR FSLSPLCHLS PPSPSPASSL LLLPKLSGFS TLSTRRCVRV RRFSENPLTT VMASRSASRL RSLASACSGG AEDGGGTSNG SLSASATATE 101: DDELAIGTGY RLPPPEIRDI VDAPPVPALS FSPHRDKILF LKRRALPPLA DLARPEEKLA GVRIDGYCNT RSRMSFYTGL GIHQLLPDGT LSPEKEITGI 201: PDGGKINFVT WSNDGKHLAF SIRVDENGNS SKPVVWVADV ETGVARPLFN SQDIFLNAIF ESFVWIDNST LLVSTIPSSR GEPPKKPLVP SGPKTLSNET 301: KTVVQVRTFQ DLLKDEYDAD LFDYYASSQL VLASLDGTVK EVGVPAVYTS LDPSTDHKYL LVSSLHRPYS FIVPCGRFPK KVEVWTTDGR FVRQLCDLPL 401: AEDIPIASNS VRKGMRSINW RADKPSTLYW AETQDGGDAK MEVSPRDIVY MQSAEPLAGE EPEVLHKLDL RYGGISWCDD TLALVYESWY KTRRTRTWVI 501: SPGSNDVSPR ILFDRSSEDV YSDPGSTMLR RTDAGTYVIA KIKKENDEGT YVLLNGSGAT PQGNVPFLDL FDINTGNKER IWESDKEKYF ETVVALMSDQ 601: KEGDLKMEEL KILTSKESKT ENTQYSLQLW PDRKVQQITN FPHPYPQLAS LQKEMIRYQR KDGVQLTATL YLPPGYDPSK DGPLPCLFWS YPGEFKSKDA 701: AGQVRGSPNE FAGIGSTSAL LWLARRFAIL SGPTIPIIGE GDEEANDRYV EQLVASAEAA VEEVVRRGVA DRSKIAVGGH SYGAFMTANL LAHAPHLFAC 801: GIARSGAYNR TLTPFGFQNE DRTLWEATNV YVEMSPFMSA NKIKKPILLI HGEEDNNPGT LTMQSDRFFN ALKGHGALCR LVVLPHESHG YSARESIMHV 901: LWETDRWLQK YCVPNTSDAD TSPDQSKEGS DSADKVSTGT GGGNPEFGEH EVHSKLRRSL L |
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| See Also |
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Citation
If you find this resource useful please cite one of the following publications:
Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)
Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)