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AT2G47390.1
Subcellular Consensus
(Prediction and Experimental)

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SUBAcon:
plastid 1.000
What is SUBAcon?
What is ASURE?
SUBAcon computations
Experimental Localisations and PPI
FP MS/MS PPI
  • PMID:27943495 (2017): mitochondrion
  • PMID:26572690 (2016): extracellular region plant-type cell wall
  • PMID:24361574 (2014): plastid plastid stroma
  • PMID:24134884 (2013): cytoskeleton microtubules
  • PMID:21531424 (2011): plastid
  • PMID:20423899 (2010): plastid
  • PMID:20061580 (2010): plastid plastid stroma
  • PMID:19329564 (2009): peroxisome
  • PMID:18633119 (2008): plastid plastid stroma
  • PMID:18431481 (2008): plastid plastid stroma
  • PMID:16207701 (2006): plastid
  • PMID:15028209 (2004): plastid
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no PPI data
Description (TAIR10) protein_coding : Prolyl oligopeptidase family protein
Curator
Summary (TAIR10)
Computational
Description (TAIR10)
Prolyl oligopeptidase family protein; FUNCTIONS IN: serine-type peptidase activity, serine-type endopeptidase activity; INVOLVED IN: proteolysis; LOCATED IN: chloroplast stroma, chloroplast; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Peptidase S9, prolyl oligopeptidase, catalytic domain (InterPro:IPR001375), Peptidase S9A, oligopeptidase, N-terminal beta-propeller (InterPro:IPR004106); BEST Arabidopsis thaliana protein match is: acylaminoacyl-peptidase-related (TAIR:AT4G14570.1); Has 4880 Blast hits to 4877 proteins in 846 species: Archae - 179; Bacteria - 3027; Metazoa - 477; Fungi - 49; Plants - 145; Viruses - 0; Other Eukaryotes - 1003 (source: NCBI BLink).
Protein Annotations
BioGrid:4687EC:3.4.21.-eggNOG:COG1506eggNOG:KOG2100EMBL:AC002337EMBL:AY064997EMBL:AY099560
EMBL:BT002650EMBL:CP002685EnsemblPlants:AT2G47390EnsemblPlants:AT2G47390.1entrez:819352ESTHER:arath-CGEPGene3D:2.120.10.30
Gene3D:3.40.50.1820GeneID:819352Genevisible:Q8VZF3GO:GO:0008236GO:GO:0009507GO:GO:0009570hmmpanther:PTHR11731
hmmpanther:PTHR11731:SF117HOGENOM:HOG000295385InParanoid:Q8VZF3InterPro:IPR001375InterPro:IPR011042InterPro:IPR029058iPTMnet:Q8VZF3
KEGG:ath:AT2G47390MEROPS:S09.021OMA:FPIQSERPaxDb:Q8VZF3Pfam:PF00326Pfam:Q8VZF3PIR:F84914
PRIDE:Q8VZF3PRO:PR:Q8VZF3ProteinModelPortal:Q8VZF3Proteomes:UP000006548RefSeq:NP_850473.1SMR:Q8VZF3STRING:3702.AT2G47390.1
SUPFAM:SSF53474SUPFAM:SSF82171TAIR:AT2G47390UniGene:At.26870UniGene:At.57178UniProt:Q8VZF3
Coordinates (TAIR10) chr2:-:19442278..19446253
Molecular Weight (calculated) 106272.00 Da
IEP (calculated) 6.36
GRAVY (calculated) -0.39
Length 961 amino acids
Sequence (TAIR10)
(BLAST)
001: MMRFHKACHR FSLSPLCHLS PPSPSPASSL LLLPKLSGFS TLSTRRCVRV RRFSENPLTT VMASRSASRL RSLASACSGG AEDGGGTSNG SLSASATATE
101: DDELAIGTGY RLPPPEIRDI VDAPPVPALS FSPHRDKILF LKRRALPPLA DLARPEEKLA GVRIDGYCNT RSRMSFYTGL GIHQLLPDGT LSPEKEITGI
201: PDGGKINFVT WSNDGKHLAF SIRVDENGNS SKPVVWVADV ETGVARPLFN SQDIFLNAIF ESFVWIDNST LLVSTIPSSR GEPPKKPLVP SGPKTLSNET
301: KTVVQVRTFQ DLLKDEYDAD LFDYYASSQL VLASLDGTVK EVGVPAVYTS LDPSTDHKYL LVSSLHRPYS FIVPCGRFPK KVEVWTTDGR FVRQLCDLPL
401: AEDIPIASNS VRKGMRSINW RADKPSTLYW AETQDGGDAK MEVSPRDIVY MQSAEPLAGE EPEVLHKLDL RYGGISWCDD TLALVYESWY KTRRTRTWVI
501: SPGSNDVSPR ILFDRSSEDV YSDPGSTMLR RTDAGTYVIA KIKKENDEGT YVLLNGSGAT PQGNVPFLDL FDINTGNKER IWESDKEKYF ETVVALMSDQ
601: KEGDLKMEEL KILTSKESKT ENTQYSLQLW PDRKVQQITN FPHPYPQLAS LQKEMIRYQR KDGVQLTATL YLPPGYDPSK DGPLPCLFWS YPGEFKSKDA
701: AGQVRGSPNE FAGIGSTSAL LWLARRFAIL SGPTIPIIGE GDEEANDRYV EQLVASAEAA VEEVVRRGVA DRSKIAVGGH SYGAFMTANL LAHAPHLFAC
801: GIARSGAYNR TLTPFGFQNE DRTLWEATNV YVEMSPFMSA NKIKKPILLI HGEEDNNPGT LTMQSDRFFN ALKGHGALCR LVVLPHESHG YSARESIMHV
901: LWETDRWLQK YCVPNTSDAD TSPDQSKEGS DSADKVSTGT GGGNPEFGEH EVHSKLRRSL L
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)