AT2G45900.1
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Subcellular Consensus
(Prediction and Experimental) min:  :max.
SUBAcon:nucleus 1.000 What is SUBAcon? |
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| Experimental Localisations and PPI |
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SUBAcon links
AGI-AGI relationships |
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| Description (TAIR10) | protein_coding : Phosphatidylinositol N-acetyglucosaminlytransferase subunit P-related | ||||||||||||||||||||||||||||
| Curator Summary (TAIR10) |
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| Computational Description (TAIR10) |
Phosphatidylinositol N-acetyglucosaminlytransferase subunit P-related; BEST Arabidopsis thaliana protein match is: Phosphatidylinositol N-acetyglucosaminlytransferase subunit P-related (TAIR:AT3G61380.1); Has 396 Blast hits to 374 proteins in 94 species: Archae - 0; Bacteria - 31; Metazoa - 55; Fungi - 42; Plants - 167; Viruses - 0; Other Eukaryotes - 101 (source: NCBI BLink). | ||||||||||||||||||||||||||||
| Protein Annotations |
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| Coordinates (TAIR10) | chr2:-:18886069..18888674 | ||||||||||||||||||||||||||||
| Molecular Weight (calculated) | 81668.80 Da | ||||||||||||||||||||||||||||
| IEP (calculated) | 4.35 | ||||||||||||||||||||||||||||
| GRAVY (calculated) | -0.65 | ||||||||||||||||||||||||||||
| Length | 720 amino acids | ||||||||||||||||||||||||||||
| Sequence (TAIR10) (BLAST) |
001: MEKEICRRHL SREGLGCVWV FMSMFDFRHG GSNQKLLMDK KRRSKRIIIG NNGVFETKVE KQLTCDCDCD EESEAEMQSV KKLIEAEIDE KTTQKCEARN 101: RKRRSRTCSK ISEDINVLIA GDDDDDHAEK SDNECPIVSH NEVDMVNDDS EEKFSELIKR LIAQKESEVE SCKKNLVDAF QVLDSKEESL NIGTPTSGDS 201: QRIKETQTIV ILKPEPNTLD VGSSPGTPST DNKAKNEKFS SRFSLSRIRR RLKFAVGKNP CNAQHDSDPD PDADALSSSM SQNCCLGEEI ETNPGSDGEI 301: LPDIASKGEA NKEDTFHESE KDSKKSMCGI YIAAKKHLSE MLAEGDIDAD LPDKEVPRIL GKILALPEFF TPENSPRVTL ALDHQIIEKP NIQQCSSKDY 401: YYEPLRLDSN NHEETEFMPV PEDTRMEEEE QTVMDSLSEA ISSSIIQQDA YIDEDEHKQL LEKEVLKEGQ SPCSPPNSSV RMSECQENTT DVLGKSSPVS 501: VLEPFFTDDD TSPNSSRFSS AEMRMQPLCI RFDEPDFPGP EKDNDVKTRM DDKELALEYI QAVVKSSELN WEELLARSFY SEKILEQALM DDIDFCSTNL 601: CSDKKLLFDC INEVLMEFCG HGPWISFVKP AMHFFPDMEN AVEVVQEEVY WHLLPLPSPH TLDQIVRKDL ARTGNWMDLR FDIGCIVSET GEIILDELLE 701: EIISNCRDLV QPERINKLVP |
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| See Also |
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Citation
If you find this resource useful please cite one of the following publications:
Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)
Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)