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AT2G37390.1
Subcellular Consensus
(Prediction and Experimental)
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SUBAcon:
nucleus 1.000
What is SUBAcon?
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no PPI data
Description (TAIR10) protein_coding : Chloroplast-targeted copper chaperone protein
Curator
Summary (TAIR10)
Computational
Description (TAIR10)
Chloroplast-targeted copper chaperone protein; FUNCTIONS IN: metal ion binding; INVOLVED IN: metal ion transport; LOCATED IN: cellular_component unknown; EXPRESSED IN: 12 plant structures; EXPRESSED DURING: 7 growth stages; CONTAINS InterPro DOMAIN/s: Heavy metal transport/detoxification protein (InterPro:IPR006121), Copper chaperone, chloroplast-targeted, predicted (InterPro:IPR016578); BEST Arabidopsis thaliana protein match is: Chloroplast-targeted copper chaperone protein (TAIR:AT3G53530.1); Has 1086 Blast hits to 1014 proteins in 44 species: Archae - 0; Bacteria - 10; Metazoa - 2; Fungi - 4; Plants - 1070; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
Protein Annotations
DNASU:818315eggNOG:COG2608eggNOG:KOG1603EMBL:AY954819
EMBL:CP002685EnsemblPlants:AT2G37390EnsemblPlants:AT2G37390.1entrez:818315
ExpressionAtlas:Q58FZ0GeneID:818315GO:GO:0005737GO:GO:0030001
GO:GO:0046914GO:GO:0046916Gramene:AT2G37390.1hmmpanther:PTHR22814
hmmpanther:PTHR22814:SF16HOGENOM:HOG000238702InterPro:IPR006121InterPro:IPR016578
OMA:TEKKTTCPfam:PF00403Pfscan:PS50846PhylomeDB:Q58FZ0
PIRSF:PIRSF011221PROSITE:PS50846Proteomes:UP000006548RefSeq:NP_181275.2
SMR:Q58FZ0STRING:3702.AT2G37390.1SUPFAM:SSF55008TAIR:AT2G37390
tair10-symbols:NAKR2UniGene:At.37430UniProt:Q58FZ0
Coordinates (TAIR10) chr2:+:15694300..15695461
Molecular Weight (calculated) 27869.10 Da
IEP (calculated) 8.89
GRAVY (calculated) -0.51
Length 259 amino acids
Sequence (TAIR10)
(BLAST)
001: MKGRMFCASQ ASTAICSSMD HVHKSTTTDE DERNSGRAID RHNPIIKDGR RSFADDFIKL PTSAEDGEMS NKKLEIYKGR RSITGRRSTG GGGGGGAAAL
101: LKLITNDIGL ARKSFSCVAR PACDLIKTPV GSTRYLLGSD PDSITGSVDQ DPAKTVEAEA PAGEDKTLTE KKTTCGDTDQ QVVVLKVSLH CRGCEGKVRK
201: HLARMQGVTS FNIDFAAKKV TVTGDITPLE ILDSISKVKN AQFWTNPTIP KPNVETQNP
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)