AT2G03730.1
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Subcellular Consensus
(Prediction and Experimental) min:  :max.
SUBAcon:nucleus 1.000 What is SUBAcon? |
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| Experimental Localisations and PPI |
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SUBAcon links
AGI-AGI relationships |
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| Description (TAIR10) | protein_coding : ACT domain repeat 5 | ||||||||||||||||||||||||||||||||||||||||||||||||
| Curator Summary (TAIR10) |
Member of a small family of ACT domain containing proteins. ACT domains are thought to be involved in amino acid binding. | ||||||||||||||||||||||||||||||||||||||||||||||||
| Computational Description (TAIR10) |
ACT domain repeat 5 (ACR5); FUNCTIONS IN: amino acid binding; INVOLVED IN: metabolic process; LOCATED IN: cellular_component unknown; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Amino acid-binding ACT (InterPro:IPR002912); BEST Arabidopsis thaliana protein match is: ACT domain repeat 4 (TAIR:AT1G69040.2); Has 2794 Blast hits to 1588 proteins in 427 species: Archae - 0; Bacteria - 1672; Metazoa - 0; Fungi - 0; Plants - 582; Viruses - 0; Other Eukaryotes - 540 (source: NCBI BLink). | ||||||||||||||||||||||||||||||||||||||||||||||||
| Protein Annotations |
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| Coordinates (TAIR10) | chr2:-:1137820..1139809 | ||||||||||||||||||||||||||||||||||||||||||||||||
| Molecular Weight (calculated) | 51146.80 Da | ||||||||||||||||||||||||||||||||||||||||||||||||
| IEP (calculated) | 5.40 | ||||||||||||||||||||||||||||||||||||||||||||||||
| GRAVY (calculated) | -0.31 | ||||||||||||||||||||||||||||||||||||||||||||||||
| Length | 456 amino acids | ||||||||||||||||||||||||||||||||||||||||||||||||
| Sequence (TAIR10) (BLAST) |
001: MDVCLSYSYN MDDEIAKFIR RVNPPRVVID NEVCKDVTVI KVDSANKHGI LLEVVQVLTE LNLTIKKAYI SSDGGWFMDV FNVTDQDGNK VTDEIVLEYI 101: RKSLGPDESS CFSPSMRSTI GVKQSVDYTV VELTGTDRPG LLSELCAVLM DLQCNVVNAE IWTHRAKAAA VLQVTDEETC SAITDPERLS KIRKLLGYVL 201: TGGSSGRRFR EPKTTVSSAL NETHTDRKLH QLMFADRDYD EWENNVDDED KCGRVIPDVD VSNLHDLDYS IVMIKCKDRP KLLFDTVFTL TDMNYVVSHA 301: SIDAEGPQAY QEYYIRHTDG SPVKSEAERQ RVIKCLKAAI QRRVSEGLKL ELCTSDRVGL LSDVTRIFRE NSLTVTRAEV KTKGDKALNT FYVRDASGYQ 401: VDTKTIESIR QVIGQTILQV KGGNTDAKPS PQDSPTGFLF GVFKSRSFVN FGLIRS |
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| See Also |
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Citation
If you find this resource useful please cite one of the following publications:
Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)
Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)