AT1G51350.1
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Subcellular Consensus
(Prediction and Experimental) min:  :max.
SUBAcon:plastid 1.000 What is SUBAcon? |
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| Experimental Localisations and PPI |
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SUBAcon links
AGI-AGI relationships |
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| Description (TAIR10) | protein_coding : ARM repeat superfamily protein | ||||||||||||||||||||||||||||||||
| Curator Summary (TAIR10) |
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| Computational Description (TAIR10) |
ARM repeat superfamily protein; FUNCTIONS IN: binding; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast thylakoid lumen; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: HEAT (InterPro:IPR000357), Armadillo-like helical (InterPro:IPR011989), Armadillo (InterPro:IPR000225), Armadillo-type fold (InterPro:IPR016024); Has 1374 Blast hits to 1058 proteins in 203 species: Archae - 0; Bacteria - 0; Metazoa - 493; Fungi - 490; Plants - 280; Viruses - 0; Other Eukaryotes - 111 (source: NCBI BLink). | ||||||||||||||||||||||||||||||||
| Protein Annotations |
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| Coordinates (TAIR10) | chr1:+:19035851..19038738 | ||||||||||||||||||||||||||||||||
| Molecular Weight (calculated) | 72397.10 Da | ||||||||||||||||||||||||||||||||
| IEP (calculated) | 5.23 | ||||||||||||||||||||||||||||||||
| GRAVY (calculated) | 0.03 | ||||||||||||||||||||||||||||||||
| Length | 666 amino acids | ||||||||||||||||||||||||||||||||
| Sequence (TAIR10) (BLAST) |
001: MPTTTTSSAS SSSSASGNNR QSDVFSRLAS SDPEVKLKAL REVKNQIIGN RTKKLSFLKL GAIPAIASVL ADADDSDECN NILVQSAAAL GSFACGFEAG 101: VQAVLDAGVF PHLLRLLTNT DEKVVDAGAR SLRMIFQSNQ APKYDFLQEK NMEFLFSLLN SENENVSGLG ASIIAHACGT SVEQRVLCEA GVLEKLVILL 201: DGSLSQREAC LESLATVLKN NPEAVSDFVG LESGKYFNSV TELTKDRYPR TRLLSCLCLV VIYNTSPSYF INMGTKSSLI TTLLELLNDP GQSGDDAALG 301: LSCLIAEKED LQQLAYEADA IKNIVEILKT GSELQSKRLQ GLFLSLAELC SKLEDCRCSF LSLQVLDLLT DALRHKDADV RAAACICFRN AARSVKSLSA 401: GRFNSDHVML PLVQLLHDPS SSVQVAVLGA LNNIVMDFSS PKSSFIEYGG IKQLTELSKS MDPNTRCSAL RALRNLMFLA DIKRKELFYS DVKAQGLACL 501: ISDPEPPVQE QALALLRNLV DGCISSIEFV FDEDGLILDT VGRQLRKAPQ AQMAIQGMYV LTNVASGTEL HKEAVMEQLF PQAKAGSENF MLKFLQSDES 601: QLRSAAVWTI INLISPSSPG AFDRHVKLRN AGIIPQLKNM VNDACLDVKI RIRTVLGQSM SFGDNY |
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| See Also |
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Citation
If you find this resource useful please cite one of the following publications:
Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)
Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)