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AT5G65690.1
Subcellular Consensus
(Prediction and Experimental)
min: heatmap :max

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SUBAcon:
cytosol 0.983
What is SUBAcon?
Experimental Localisations and PPI
FP MS/MS PPI
  • PMID:26572690 (2016): extracellular region plant-type cell wall
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no PPI data
Description (TAIR10) protein_coding : phosphoenolpyruvate carboxykinase 2
Curator
Summary (TAIR10)
Encodes a putative phosphoenolpyruvate carboxykinase (ATP-dependent).
Computational
Description (TAIR10)
phosphoenolpyruvate carboxykinase 2 (PCK2); FUNCTIONS IN: phosphoenolpyruvate carboxykinase activity, purine nucleotide binding, phosphoenolpyruvate carboxykinase (ATP) activity, ATP binding; INVOLVED IN: gluconeogenesis; LOCATED IN: cellular_component unknown; EXPRESSED IN: stem, male gametophyte, root, flower, trichome; EXPRESSED DURING: seedling growth; CONTAINS InterPro DOMAIN/s: Phosphoenolpyruvate carboxykinase, N-terminal (InterPro:IPR008210), Phosphoenolpyruvate carboxykinase (ATP), conserved site (InterPro:IPR015994), Phosphoenolpyruvate carboxykinase, ATP-utilising (InterPro:IPR001272), Phosphoenolpyruvate carboxykinase, C-terminal (InterPro:IPR013035); BEST Arabidopsis thaliana protein match is: phosphoenolpyruvate carboxykinase 1 (TAIR:AT4G37870.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).
Protein Annotations
eggNOG:COG1866eggNOG:ENOG410IE0YEMBL:BT046193EMBL:CP002688
EnsemblPlants:AT5G65690EnsemblPlants:AT5G65690.1entrez:836696Gene3D:3.40.449.10
Gene3D:3.90.228.20GeneID:836696GO:GO:0004612GO:GO:0005524
GO:GO:0005829GO:GO:0006094GO:GO:0016301Gramene:AT5G65690.1
gramene_pathway:4.1.1.49gramene_pathway:PWY-561gramene_pathway:PWYQT-4428HAMAP:MF_00453
HOGENOM:HOG000271471InterPro:IPR001272InterPro:IPR008210InterPro:IPR013035
InterPro:IPR015994KEGG:00010+4.1.1.49KEGG:00020+4.1.1.49KEGG:00620+4.1.1.49
KEGG:00710+4.1.1.49KEGG:ath:AT5G65690KO:K01610OMA:RTITEYP
Pfam:PF01293PhylomeDB:B5X574PROSITE:PS00532Proteomes:UP000006548
RefSeq:NP_680468.1scanprosite:PS00532SMR:B5X574STRING:3702.AT5G65690.1
SUPFAM:SSF53795SUPFAM:SSF68923TAIR:AT5G65690tair10-symbols:PCK2
tair10-symbols:PEPCKTIGRfam:TIGR00224TIGRFAMs:TIGR00224UniGene:At.55706
unipathway:UPA00138UniProt:B5X574
Coordinates (TAIR10) chr5:+:26266477..26269486
Molecular Weight (calculated) 72895.40 Da
IEP (calculated) 6.37
GRAVY (calculated) -0.29
Length 670 amino acids
Sequence (TAIR10)
(BLAST)
001: MAGNGNESTG GDFSFSAAAA RDALPRITTE KGGKSPGPAD VCQDDIAPRV NFQTIDELHS LQKKRSAPTT PLRDGSASGV SGTSGPTTPV SSETMLQSVS
101: ASLASLTRET GPKLIRGDPT SAAKVAHVPV TPTSLPAADV SDSGLKFTHI LHNLSPAELY EQAIKFEKGS FVTSTGALAT LSGAKTGRSP KDKRVVKDDT
201: TEAELWWGKG SPNIEMDEKT FLVNRERAVD YLNSLDKVFV NDQYLNWDPE NKIKVRIVSA RAYHSLFMHN MCIRPTPEEL ENFGTPDFTI YNAGKFPCNR
301: FTHYMTSSTS VDINLGRREM VILGTQYAGE MKKGLFGVMH YLMPKRKILS LHSGCNMGKD GDVALFFGLS GTGKTTLSTD HNRYLIGDDE HCWSEAGVSN
401: IEGGCYAKCI DLARDKEPDI WNAIKFGTVL ENVVFDEHTR EVDYTDKSVT ENTRAAYPIE YIPNSKIPCV GPHPKNVILL ACDAFGVLPP ISKLNLAQTM
501: YHFISGYTAL VAGTEEGVKE PRATFSACFG AAFIMLHPTK YAAMLAEKMQ AQGATGWLVN TGWSGGSYGT GSRIKLAYTR KIIDAIHSGS LLNASYRKTD
601: IFGLEIPNEV EGVPSEILEP INAWPDKMAY EDTLLKLAGL FKSNFETFTS HKIGDDGKLT EEILAAGPNF
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)