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AT1G61820.1
Subcellular Consensus
(Prediction and Experimental)
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SUBAcon:
extracellular 1.000
What is SUBAcon?
Experimental Localisations and PPI
FP MS/MS PPI
  • PMID:26572690 (2016): extracellular region plant-type cell wall
  • PMID:18998720 (2009): extracellular region
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no PPI data
Description (TAIR10) protein_coding : beta glucosidase 46
Curator
Summary (TAIR10)
Computational
Description (TAIR10)
beta glucosidase 46 (BGLU46); FUNCTIONS IN: cation binding, hydrolase activity, hydrolyzing O-glycosyl compounds, catalytic activity; INVOLVED IN: lignin biosynthetic process; LOCATED IN: endomembrane system; EXPRESSED IN: 12 plant structures; EXPRESSED DURING: 4 anthesis, F mature embryo stage, petal differentiation and expansion stage, E expanded cotyledon stage, D bilateral stage; CONTAINS InterPro DOMAIN/s: Glycoside hydrolase, family 1 (InterPro:IPR001360), Glycoside hydrolase, family 1, active site (InterPro:IPR018120), Glycoside hydrolase, catalytic core (InterPro:IPR017853), Glycoside hydrolase, subgroup, catalytic core (InterPro:IPR013781); BEST Arabidopsis thaliana protein match is: beta-glucosidase 45 (TAIR:AT1G61810.1); Has 11434 Blast hits to 11077 proteins in 1473 species: Archae - 142; Bacteria - 7926; Metazoa - 720; Fungi - 201; Plants - 1444; Viruses - 0; Other Eukaryotes - 1001 (source: NCBI BLink).
Protein Annotations
BioCyc:ARA:AT1G61820-MONOMERBioCyc:ARA:GQT-1886-MONOMERCAZy:GH1EC:3.2.1.21
eggNOG:COG2723eggNOG:KOG0626EMBL:AC004392EMBL:BT015331
EMBL:BT015708EMBL:BX816529EMBL:CP002684EnsemblPlants:AT1G61820
EnsemblPlants:AT1G61820.1entrez:842479ExpressionAtlas:O80690Gene3D:3.20.20.80
GeneID:842479Genevisible:O80690GO:GO:0005975GO:GO:0008422
GO:GO:0009809GO:GO:0047782hmmpanther:PTHR10353hmmpanther:PTHR10353:SF27
HOGENOM:HOG000088630InParanoid:O80690InterPro:IPR001360InterPro:IPR013781
InterPro:IPR017853InterPro:IPR018120InterPro:IPR033132KEGG:ath:AT1G61820
KO:K05350OMA:GYFANICPANTHER:PTHR10353PaxDb:O80690
Pfam:O80690Pfam:PF00232PhylomeDB:O80690PIR:T02128
PRIDE:O80690PRINTS:PR00131PRO:PR:O80690PROSITE:PS00572
PROSITE:PS00653ProteinModelPortal:O80690Proteomes:UP000006548RefSeq:NP_850968.1
SABIO-RK:O80690scanprosite:PS00572scanprosite:PS00653SMR:O80690
STRING:3702.AT1G61820.1SUPFAM:SSF51445TAIR:AT1G61820tair10-symbols:BGLU46
UniGene:At.27913UniProt:O80690
Coordinates (TAIR10) chr1:+:22835452..22838444
Molecular Weight (calculated) 59116.00 Da
IEP (calculated) 6.92
GRAVY (calculated) -0.37
Length 516 amino acids
Sequence (TAIR10)
(BLAST)
001: MKTFANFAIL FLLQSLLFPL YSSCLHQTSD DSSPFPSDFL FGTASSAFQY EGAFLTDGKG LNNWDVFAHE NPGKIVDGSN GDIATDQYHR YMEDIQSMNF
101: LGVNSYRLSI SWSRVLPNGR FGVINYKGIK YYNNLIDALI KKGITPFVTL NHFDYPQELE NRFKSWLSSE MQKDFGYLAD ICFKHFGDRV KHWITINEPN
201: QHISLAYRSG LFPPARCSMP YGNCTHGNSE TEPFIAAHNM ILAHAKAIQI YRTKYQREQK GIIGIVVQTS WFEPISDSIA DKNAAERAQS FYSNWILDPV
301: VYGKYPEEMV NLLGSALPKF SSNEMNSLMS YKSDFLGINH YTSYFIQDCL ITACNSGDGA SKSEGLALKL DRKGNVSIGE LTDVNWQHID PNGFRKMLNY
401: LKNRYHNIPM YITENGFGQL QKPETTVEEL LHDTKRIQYL SGYLDALKAA MRDGANVKGY FAWSLLDNFE WLYGYKVRFG LFHVDFTTLK RTPKQSATWY
501: KNFIEQNVNI EDQIDK
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)