AT1G08920.1
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Subcellular Consensus
(Prediction and Experimental) min:  :max.
SUBAcon:vacuole 1.000 What is SUBAcon? |
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| Experimental Localisations and PPI |
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SUBAcon links
AGI-AGI relationships |
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| Description (TAIR10) | protein_coding : ERD (early response to dehydration) six-like 1 | ||||||||||||||||||||||||||||||||||||||||||||
| Curator Summary (TAIR10) |
Encodes ESL1, a transporter for monosaccharides. | ||||||||||||||||||||||||||||||||||||||||||||
| Computational Description (TAIR10) |
ERD (early response to dehydration) six-like 1 (ESL1); CONTAINS InterPro DOMAIN/s: Sugar transporter, conserved site (InterPro:IPR005829), Major facilitator superfamily (InterPro:IPR020846), General substrate transporter (InterPro:IPR005828), Sugar/inositol transporter (InterPro:IPR003663), Major facilitator superfamily, general substrate transporter (InterPro:IPR016196); BEST Arabidopsis thaliana protein match is: Major facilitator superfamily protein (TAIR:AT1G08930.2); Has 23660 Blast hits to 23155 proteins in 1879 species: Archae - 378; Bacteria - 9422; Metazoa - 4252; Fungi - 6142; Plants - 2335; Viruses - 0; Other Eukaryotes - 1131 (source: NCBI BLink). | ||||||||||||||||||||||||||||||||||||||||||||
| Protein Annotations |
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| Coordinates (TAIR10) | chr1:+:2867446..2870360 | ||||||||||||||||||||||||||||||||||||||||||||
| Molecular Weight (calculated) | 51302.60 Da | ||||||||||||||||||||||||||||||||||||||||||||
| IEP (calculated) | 7.15 | ||||||||||||||||||||||||||||||||||||||||||||
| GRAVY (calculated) | 0.65 | ||||||||||||||||||||||||||||||||||||||||||||
| Length | 470 amino acids | ||||||||||||||||||||||||||||||||||||||||||||
| Sequence (TAIR10) (BLAST) |
001: MTMSENSRNL EAGLLLRKNQ NDINECRITA VVLFSTFVSV CGSFCFGCAA GYSSVAQTGI INDLGLSVAQ YSMFGSIMTF GGMIGAIFSG KVADLMGRKG 101: TMWFAQIFCI FGWVAVALAK DSMWLDIGRL STGFAVGLLS YVIPVYIAEI TPKHVRGAFV FANQLMQSCG LSLFYVIGNF VHWRNLALIG LIPCALQVVT 201: LFFIPESPRL LGKWGHEKEC RASLQSLRGD DADISEEANT IKETMILFDE GPKSRVMDLF QRRYAPSVVI GVGLMLLQQL SGSSGLMYYV GSVFDKGGFP 301: SSIGSMILAV IMIPKALLGL ILVEKMGRRP LLLASTGGMC FFSLLLSFSF CFRSYGMLDE LTPIFTCIGV VGFISSFAVG MGGLPWIIMS EIFPMNVKVS 401: AGTLVTLANW SFGWIVAFAY NFMLEWNASG TFLIFFTICG AGIVFIYAMV PETKGRTLED IQASLTDFLQ |
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| See Also |
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Citation
If you find this resource useful please cite one of the following publications:
Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)
Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)