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AT1G62570.1
Subcellular Consensus
(Prediction and Experimental)
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SUBAcon:
plasma membrane 0.401
vacuole 0.355
What is SUBAcon?
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no PPI data
Description (TAIR10) protein_coding : flavin-monooxygenase glucosinolate S-oxygenase 4
Curator
Summary (TAIR10)
belongs to the flavin-monooxygenase (FMO) family, encodes a glucosinolate S-oxygenase that catalyzes the conversion of methylthioalkyl glucosinolates to methylsulfinylalkyl glucosinolates
Computational
Description (TAIR10)
flavin-monooxygenase glucosinolate S-oxygenase 4 (FMO GS-OX4); CONTAINS InterPro DOMAIN/s: Flavin-containing monooxygenase FMO (InterPro:IPR000960), Flavin-containing monooxygenase-like (InterPro:IPR020946); BEST Arabidopsis thaliana protein match is: flavin-monooxygenase glucosinolate S-oxygenase 2 (TAIR:AT1G62540.1); Has 12978 Blast hits to 12465 proteins in 1535 species: Archae - 27; Bacteria - 6311; Metazoa - 1188; Fungi - 1455; Plants - 842; Viruses - 0; Other Eukaryotes - 3155 (source: NCBI BLink).
Protein Annotations
BioCyc:MetaCyc:AT1G62570-MONOMEREC:1.8.-.-eggNOG:COG2072eggNOG:KOG1399
EMBL:AC005698EMBL:AY054642EMBL:AY081554EMBL:CP002684
EnsemblPlants:AT1G62570EnsemblPlants:AT1G62570.1entrez:842554Gene3D:3.50.50.60
GeneID:842554Genevisible:Q93Y23GO:GO:0004499GO:GO:0019761
GO:GO:0050660GO:GO:0050661GO:GO:0080103GO:GO:0080107
Gramene:AT1G62570.1gramene_pathway:1.1.1.-gramene_pathway:2.1.1.-gramene_pathway:PWY-1187
gramene_pathway:PWYQT-4471gramene_pathway:PWYQT-4472gramene_pathway:PWYQT-4473gramene_pathway:PWYQT-4474
gramene_pathway:PWYQT-4475hmmpanther:PTHR23023hmmpanther:PTHR23023:SF94HOGENOM:HOG000237857
InParanoid:Q93Y23InterPro:IPR000960InterPro:IPR020946InterPro:IPR023753
iPTMnet:Q93Y23KEGG:ath:AT1G62570OMA:CINIMNPPaxDb:Q93Y23
Pfam:PF00743Pfam:Q93Y23PhylomeDB:Q93Y23PIR:E96651
PRIDE:Q93Y23PRINTS:PR00370PRO:PR:Q93Y23ProteinModelPortal:Q93Y23
Proteomes:UP000006548Reactome:R-ATH-217271RefSeq:NP_564797.1SMR:Q93Y23
STRING:3702.AT1G62570.1SUPFAM:SSF51905TAIR:AT1G62570tair10-symbols:FMO GS-OX4
UniGene:At.22246UniProt:Q93Y23
Coordinates (TAIR10) chr1:+:23169207..23171783
Molecular Weight (calculated) 52461.80 Da
IEP (calculated) 5.46
GRAVY (calculated) -0.47
Length 461 amino acids
Sequence (TAIR10)
(BLAST)
001: MAPAPSPINS QHVAVIGAGA AGLVAARELR REGHTVVVLD REKQVGGLWV YTPETESDEL GLDPTRPIVH SSVYKSLRTN LPRECMGYKD FPFVPRGDDP
101: SRDSRRYPSH REVLAYLQDF ATEFNIEEMI RFETEVLRVE PVNGKWRVQS KTGGGFSNDE IYDAVVMCCG HFAEPNIAQI PGIESWPGRQ THSHSYRVPD
201: PFKDEVVVVI GNFASGADIS RDISKVAKEV HIASRASKSN TFEKRPVPNN NLWMHSEIDT AHEDGTIVFK NGKVVHADTI VHCTGYKYYF PFLETNNYMR
301: VDDNRVEPLY KHIFPPALAP GLSFIGLPAM GLQFYMFEVQ SKWVAAVLSG RVTLPSVDEM MDDLKLSYET QEALGIPKRY THKLGKSQCE YLDWIADLCG
401: FPHVEHWRDQ EVTRGYQRLG NQPETFRDEW DDDDLMEEAY EDFARLNLIN FHPSRFLESG R
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)