AT2G19800.1
Subcellular Consensus
(Prediction and Experimental) min: :max .
SUBAcon:cytosol 1.000 What is SUBAcon? |
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Experimental Localisations and PPI |
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SUBAcon links
AGI-AGI relationships |
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Description (TAIR10) | protein_coding : myo-inositol oxygenase 2 | ||||||||||||||||||||||||||||||||||||||||||||
Curator Summary (TAIR10) |
Encodes a myo-inositol oxygenase family gene. | ||||||||||||||||||||||||||||||||||||||||||||
Computational Description (TAIR10) |
myo-inositol oxygenase 2 (MIOX2); FUNCTIONS IN: inositol oxygenase activity; INVOLVED IN: syncytium formation; LOCATED IN: cytoplasm; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF706 (InterPro:IPR007828); BEST Arabidopsis thaliana protein match is: myo-inositol oxygenase 4 (TAIR:AT4G26260.2); Has 489 Blast hits to 489 proteins in 159 species: Archae - 0; Bacteria - 27; Metazoa - 132; Fungi - 130; Plants - 97; Viruses - 0; Other Eukaryotes - 103 (source: NCBI BLink). | ||||||||||||||||||||||||||||||||||||||||||||
Protein Annotations |
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Coordinates (TAIR10) | chr2:-:8531106..8533354 | ||||||||||||||||||||||||||||||||||||||||||||
Molecular Weight (calculated) | 37049.80 Da | ||||||||||||||||||||||||||||||||||||||||||||
IEP (calculated) | 5.37 | ||||||||||||||||||||||||||||||||||||||||||||
GRAVY (calculated) | -0.57 | ||||||||||||||||||||||||||||||||||||||||||||
Length | 317 amino acids | ||||||||||||||||||||||||||||||||||||||||||||
Sequence (TAIR10) (BLAST) |
001: MTILVEHFVP DSRVDEKKVI EERDNELVLD GGFVVPKSKE TDAFDAPDMN FLGHSFRDYE NGESERQQGV EEFYRMQHIH QTYDFVKKMR KEYGKLNKME 101: MSIWECCELL NNVVDESDPD LDEPQIQHLL QTAEAIRRDY PDEDWLHLTA LIHDLGKVLL LPEFGGLPQW AVVGDTFPVG CTFDSANIHH KYFKGNHDIN 201: NPKYNTKNGV YTEGCGLDNV LMSWGHDDYM YLVAKKNGTT LPHAGLFIIR YHSFYPLHKA GAYTHLMNDE DRDDLKWLHV FNKYDLYSKS KVLVDVEQVK 301: PYYISLINKY FPAKLKW |
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See Also |
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Citation
If you find this resource useful please cite one of the following publications:
Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)
Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)