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AT2G19800.1
Subcellular Consensus
(Prediction and Experimental)
min: heatmap :max

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SUBAcon:
cytosol 1.000
What is SUBAcon?
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no PPI data
Description (TAIR10) protein_coding : myo-inositol oxygenase 2
Curator
Summary (TAIR10)
Encodes a myo-inositol oxygenase family gene.
Computational
Description (TAIR10)
myo-inositol oxygenase 2 (MIOX2); FUNCTIONS IN: inositol oxygenase activity; INVOLVED IN: syncytium formation; LOCATED IN: cytoplasm; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF706 (InterPro:IPR007828); BEST Arabidopsis thaliana protein match is: myo-inositol oxygenase 4 (TAIR:AT4G26260.2); Has 489 Blast hits to 489 proteins in 159 species: Archae - 0; Bacteria - 27; Metazoa - 132; Fungi - 130; Plants - 97; Viruses - 0; Other Eukaryotes - 103 (source: NCBI BLink).
Protein Annotations
eggNOG:ENOG410XQ4JeggNOG:KOG1573EMBL:BT033135EnsemblPlants:AT2G19800
EnsemblPlants:AT2G19800.1entrez:816499ExpressionAtlas:B4F7Q2GeneID:816499
GO:GO:0005506GO:GO:0005737GO:GO:0019310GO:GO:0050113
Gramene:AT2G19800.1gramene_pathway:1.13.99.1gramene_pathway:PWY-4841hmmpanther:PTHR12588
hmmpanther:PTHR12588:SF1InterPro:IPR007828KEGG:00053+1.13.99.1KEGG:00562+1.13.99.1
KEGG:ath:AT2G19800KO:K00469OMA:RDYENGEPANTHER:PTHR12588
PaxDb:B4F7Q2Pfam:O82200Pfam:PF05153PhylomeDB:B4F7Q2
PRIDE:B4F7Q2PRO:PR:O82200ProteinModelPortal:B4F7Q2RefSeq:NP_565459.1
SMR:B4F7Q2STRING:3702.AT2G19800.1SUPFAM:SSF109604TAIR:AT2G19800
tair10-symbols:MIOX2UniGene:At.12894unipathway:UPA00111UniProt:B4F7Q2
UniProt:O82200
Coordinates (TAIR10) chr2:-:8531106..8533354
Molecular Weight (calculated) 37049.80 Da
IEP (calculated) 5.37
GRAVY (calculated) -0.57
Length 317 amino acids
Sequence (TAIR10)
(BLAST)
001: MTILVEHFVP DSRVDEKKVI EERDNELVLD GGFVVPKSKE TDAFDAPDMN FLGHSFRDYE NGESERQQGV EEFYRMQHIH QTYDFVKKMR KEYGKLNKME
101: MSIWECCELL NNVVDESDPD LDEPQIQHLL QTAEAIRRDY PDEDWLHLTA LIHDLGKVLL LPEFGGLPQW AVVGDTFPVG CTFDSANIHH KYFKGNHDIN
201: NPKYNTKNGV YTEGCGLDNV LMSWGHDDYM YLVAKKNGTT LPHAGLFIIR YHSFYPLHKA GAYTHLMNDE DRDDLKWLHV FNKYDLYSKS KVLVDVEQVK
301: PYYISLINKY FPAKLKW
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)