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AT5G64970.1
Subcellular Consensus
(Prediction and Experimental)
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SUBAcon:
mitochondrion 0.817
What is SUBAcon?
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no PPI data
Description (TAIR10) protein_coding : Mitochondrial substrate carrier family protein
Curator
Summary (TAIR10)
Computational
Description (TAIR10)
Mitochondrial substrate carrier family protein; FUNCTIONS IN: binding, transporter activity; INVOLVED IN: transport, mitochondrial transport, transmembrane transport; LOCATED IN: mitochondrion, mitochondrial inner membrane, plastid; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Mitochondrial carrier protein (InterPro:IPR002067), Mitochondrial substrate carrier (InterPro:IPR001993), Mitochondrial substrate/solute carrier (InterPro:IPR018108); BEST Arabidopsis thaliana protein match is: Mitochondrial substrate carrier family protein (TAIR:AT1G78180.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).
Protein Annotations
eggNOG:ENOG410ZRF1eggNOG:KOG0752EMBL:AB019236EMBL:AK228570
EMBL:BT008613EMBL:BT015788EMBL:CP002688EnsemblPlants:AT5G64970
EnsemblPlants:AT5G64970.1entrez:836621Gene3D:1.50.40.10GeneID:836621
Genevisible:Q9LV81GO:GO:0005739GO:GO:0005743GO:GO:0009536
GO:GO:0016021GO:GO:0055085Gramene:AT5G64970.1hmmpanther:PTHR24089
hmmpanther:PTHR24089:SF339HOGENOM:HOG000165726InParanoid:Q9LV81InterPro:IPR002067
InterPro:IPR018108InterPro:IPR023395KEGG:ath:AT5G64970OMA:ESEMQVC
PaxDb:Q9LV81Pfam:PF00153Pfam:Q9LV81Pfscan:PS50920
PhylomeDB:Q9LV81PRIDE:Q9LV81PRINTS:PR00926PRO:PR:Q9LV81
PROSITE:PS50920ProteinModelPortal:Q9LV81Proteomes:UP000006548RefSeq:NP_201302.1
SMR:Q9LV81STRING:3702.AT5G64970.1SUPFAM:0048588SUPFAM:SSF103506
TAIR:AT5G64970UniGene:At.72847UniGene:At.7855UniProt:Q9LV81
Coordinates (TAIR10) chr5:-:25958806..25960443
Molecular Weight (calculated) 46820.50 Da
IEP (calculated) 8.61
GRAVY (calculated) -0.07
Length 428 amino acids
Sequence (TAIR10)
(BLAST)
001: MRGLDRWIAE AIRSESLDHN GQIICGGLFL EESLPSSSVS FLSSKDCSVN SCRFSQKSSF LKFRRRNGTR EPLFLSVSLS INESNGEEEE GEGYNGQNGF
101: KSEKGSVLIG GGQESKEKRR VKENGAGALN TTKHLWAGAF AAMVSRTCIA PLERMKLEYI VRGEQGNLLE LIQRIATNEG IRGFWKGNLV NILRTAPFKS
201: INFYAYDTYR GQLLKLSGNE ETTNFERFVA GAAAGVTASL LCLPLDTIRT VMVAPGGEAL GGVVGAFRHM IQTEGFFSLY KGLVPSLVSM APSGAVFYGV
301: YDILKSAYLH TPEGKKRLEH MKQEGEELNA FDQLELGPMR TLLYGAIAGA CSEAATYPFE VVRRRLQMQS HAKRLSAVAT CVKIIEQGGV PALYAGLIPS
401: LLQVLPSAAI SYFVYEFMKV VLKVESSA
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)