AT2G43990.1
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Subcellular Consensus
(Prediction and Experimental) min:  :max.
SUBAcon:nucleus 1.000 What is SUBAcon? |
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| Experimental Localisations and PPI |
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SUBAcon links
AGI-AGI relationships |
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| Description (TAIR10) | protein_coding : | ||||||||||||||||||||||||
| Curator Summary (TAIR10) |
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| Computational Description (TAIR10) |
unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 9 plant structures; EXPRESSED DURING: 6 growth stages; Has 1419 Blast hits to 494 proteins in 144 species: Archae - 0; Bacteria - 300; Metazoa - 246; Fungi - 102; Plants - 31; Viruses - 2; Other Eukaryotes - 738 (source: NCBI BLink). | ||||||||||||||||||||||||
| Protein Annotations |
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| Coordinates (TAIR10) | chr2:+:18211974..18213872 | ||||||||||||||||||||||||
| Molecular Weight (calculated) | 68906.90 Da | ||||||||||||||||||||||||
| IEP (calculated) | 7.28 | ||||||||||||||||||||||||
| GRAVY (calculated) | -0.70 | ||||||||||||||||||||||||
| Length | 632 amino acids | ||||||||||||||||||||||||
| Sequence (TAIR10) (BLAST) |
001: MNRITSSSNA QTKKFPQSQP QPPEKNEKKL KRERFPVNPL RDFSTRSSGS SSCSNVSASG STSGEASNGC HRFLLSHSFS SSSSSSSSSL GVFPRRPVRS 101: VAKNPKSAPV VSKPLIRKKP SSLEEVKLKS TLTEKPNLLK SQRCKTNPVS GKRPTCKITM KPEKVSVLKK QSSVSRNVKL KDSQTTIRVD DSIAQSTPVS 201: KLETGSDLIY RRKSEATDDG RLSSNSSSYQ DRTPPVQASV SPEIQCGSSM NLSASAQSQA CYAAGHLLSG VSDKRKCKPK GILTVGENGF EVGKGKILND 301: SDEFDEGDFG NDGSYDDISV MPLPADASVH WLLSPCDEEK EHEKEISDDG FSQFQQIVEC VGHETPSPLS DRSASSDLCN ISSGRSLSPM DIYKETTRRI 401: SSSLSPNELF RFRRFIHLSS CDGEASAFDT SPTCELDPSE HLKGDKSSPL SVDTLGSENV IQTPESNSSF DNYFGLSCSQ AEIQKKHDVG SDLESLTMKF 501: QSAGLSPRIQ ASSWEPSRSS FNFDYLATSS DSIDLSQFQR GLVDRSSCHP HVTLDKVSRT HLRVEQTNSH MPEMKSQQIT DTEFDIQNHK ESAASLGKGR 601: ELLPCSAAES ISTDGGGLIC SEDSNWMACY KN |
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| See Also |
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Citation
If you find this resource useful please cite one of the following publications:
Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)
Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)