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AT5G64340.1
Subcellular Consensus
(Prediction and Experimental)
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SUBAcon:
nucleus 1.000
ASURE: nucleus
What is SUBAcon?
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
Description (TAIR10) protein_coding : sequence-specific DNA binding transcription factors;transcription regulators
Curator
Summary (TAIR10)
Encodes a bHLH(basic helix-loop-helix)-type transcription factor SAC51 [suppressor of acaulis 51]. Upregulation of SAC51 reverses the dwarf phenotype caused by a loss-of-function mutation in ACL5 (Arabidopsis thaliana ACAULIS 5) gene, suggesting that activation of SAC51 may lead to the expression of a subset of genes required for stem elongation.
Computational
Description (TAIR10)
SUPPRESSOR OF ACAULIS 51 (SAC51); BEST Arabidopsis thaliana protein match is: sequence-specific DNA binding transcription factors;transcription regulators (TAIR:AT5G09460.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).
Protein Annotations
eggNOG:ENOG410J3Z3eggNOG:ENOG410Y8WPEMBL:AB008268EMBL:AY062561
EMBL:AY093333EMBL:CP002688EnsemblPlants:AT5G64340EnsemblPlants:AT5G64340.1
entrez:836555GeneID:836555Genevisible:Q9FMF4GO:GO:0003677
GO:GO:0003700GO:GO:0005634GO:GO:0006351GO:GO:0006355
GO:GO:0009826Gramene:AT5G64340.1hmmpanther:PTHR36066hmmpanther:PTHR36066:SF2
HOGENOM:HOG000090494InParanoid:Q9FMF4InterPro:IPR011598KEGG:ath:AT5G64340
OMA:TESEMHEPaxDb:Q9FMF4Pfam:Q9FMF4Pfscan:PS50888
PhylomeDB:Q9FMF4PRIDE:Q9FMF4PRO:PR:Q9FMF4PROSITE:PS50888
ProteinModelPortal:Q9FMF4Proteomes:UP000006548RefSeq:NP_201239.1STRING:3702.AT5G64340.1
SUPFAM:SSF47459TAIR:AT5G64340tair10-symbols:SAC51UniGene:At.49218
UniGene:At.71062UniProt:Q9FMF4
Coordinates (TAIR10) chr5:-:25730890..25731936
Molecular Weight (calculated) 38703.70 Da
IEP (calculated) 5.11
GRAVY (calculated) -0.67
Length 348 amino acids
Sequence (TAIR10)
(BLAST)
001: MPLDKRQRDL PLGLSPQACF KDIVGRSVLP RIPLPELGKL YAAKLQARCL QPPPFQSLLC SHDKESYGKR FSRSDMRSWC AAATTTTTPL GALESSQKRL
101: LIFDQSGDQT RLLQCPFPLR FPSHAAAEPV KLSELQGIEK AFKEDGEEFH KSDGTESEMH EDTEEINALL YSDDDYDDDC ESDDEVMSTG HSPYPNEGVC
201: NKRELEEIDG PCKRQKLLDK VNNISDLSSL VGTESSTQLN GSSFLKDKKL PESKTISTKE DTGSGLSNEQ SKKDKIRTAL KILESVVPGA KGNEALLLLD
301: EAIDYLKLLK RDLISTEVKN QSSTTHKSPI LLLKETTWGT RNLQTDKA
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)