AT5G57500.1
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Subcellular Consensus
(Prediction and Experimental) min:  :max.
SUBAcon:extracellular 0.989 What is SUBAcon? |
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| Experimental Localisations and PPI |
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SUBAcon links
AGI-AGI relationships |
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| Description (TAIR10) | protein_coding : Galactosyltransferase family protein | ||||||||||||||||||||||||||||||||
| Curator Summary (TAIR10) |
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| Computational Description (TAIR10) |
Galactosyltransferase family protein; FUNCTIONS IN: transferase activity, transferring glycosyl groups; INVOLVED IN: protein amino acid glycosylation; LOCATED IN: endomembrane system, membrane; EXPRESSED IN: 17 plant structures; EXPRESSED DURING: 10 growth stages; CONTAINS InterPro DOMAIN/s: Glycosyl transferase, family 31 (InterPro:IPR002659); BEST Arabidopsis thaliana protein match is: Galactosyltransferase family protein (TAIR:AT3G06440.1); Has 442 Blast hits to 440 proteins in 59 species: Archae - 0; Bacteria - 0; Metazoa - 117; Fungi - 23; Plants - 226; Viruses - 0; Other Eukaryotes - 76 (source: NCBI BLink). | ||||||||||||||||||||||||||||||||
| Protein Annotations |
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| Coordinates (TAIR10) | chr5:-:23286406..23287525 | ||||||||||||||||||||||||||||||||
| Molecular Weight (calculated) | 36963.60 Da | ||||||||||||||||||||||||||||||||
| IEP (calculated) | 7.49 | ||||||||||||||||||||||||||||||||
| GRAVY (calculated) | -0.28 | ||||||||||||||||||||||||||||||||
| Length | 318 amino acids | ||||||||||||||||||||||||||||||||
| Sequence (TAIR10) (BLAST) |
001: MKSSPRSEGR KFIIPSFFFI IALCVLAFIN EIRFDSLLSF GRCALSNVPM NNGSSETPLL SSSPVDDEIR ILIGILTLPD QYSRRHFLRM IYGTQNVPDG 101: VKVDVKFVFC NLTKEDQKVL VALEIMRYDD IIILNCNENM NKGKTYTYFS SLPDIFNETD AQKPPYHYVM KADDDTYIRL ESLVASLRPL PREDLYYGYV 201: IPCPSMDPFV HYMSGMGYLV SWDIAVWLKD SEIPKKHLEG PEDKVFGDWI REGRRGKNRF NAKWSMYNFP EPPTRCTHEL WPDTIAVHLL KNQEKWIRTL 301: NYFNVTSNLK PSKLYHIP |
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| See Also |
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Citation
If you find this resource useful please cite one of the following publications:
Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)
Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)