AT4G19460.1
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Subcellular Consensus
(Prediction and Experimental) min:  :max.
SUBAcon:plasma membrane 0.869 What is SUBAcon? |
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| Experimental Localisations and PPI |
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SUBAcon links
AGI-AGI relationships |
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| Description (TAIR10) | protein_coding : UDP-Glycosyltransferase superfamily protein | ||||||||||||||||||||||||||||||||
| Curator Summary (TAIR10) |
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| Computational Description (TAIR10) |
UDP-Glycosyltransferase superfamily protein; FUNCTIONS IN: transferase activity, transferring glycosyl groups; INVOLVED IN: biosynthetic process; LOCATED IN: cellular_component unknown; EXPRESSED IN: 10 plant structures; EXPRESSED DURING: 4 anthesis, C globular stage, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Glycosyl transferase, group 1 (InterPro:IPR001296); BEST Arabidopsis thaliana protein match is: UDP-Glycosyltransferase superfamily protein (TAIR:AT1G73160.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). | ||||||||||||||||||||||||||||||||
| Protein Annotations |
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| Coordinates (TAIR10) | chr4:-:10610422..10611972 | ||||||||||||||||||||||||||||||||
| Molecular Weight (calculated) | 57933.50 Da | ||||||||||||||||||||||||||||||||
| IEP (calculated) | 8.70 | ||||||||||||||||||||||||||||||||
| GRAVY (calculated) | -0.26 | ||||||||||||||||||||||||||||||||
| Length | 516 amino acids | ||||||||||||||||||||||||||||||||
| Sequence (TAIR10) (BLAST) |
001: MNPLIEQTEP TQQQIVKKKE KTTMASQTKL KKPNSHFSLC TFLFFTVLFT IPALFLLRTS TCSSSTAAVS SSSSDTNQPP WSGDLQTAQF AWNRLDFSLT 101: NPPPKTLKLA VFSRKWPTGP NPGGMERHAF TLYTALARRG HRVHVFTSPL DQSPETNKIP PVSDQIIYPI IHSHGDAEPG KWRYNKAWEL YQEENKKEPF 201: DAVHSESVAL PHWIAREVPN LAVSWHGIAL ESLQSSIYQD LIRKPDEPRS QGFNASLYGA VLPKILDEIR FFHNYAHHIA ISDSCGEMLR DVYQIPEKRV 301: HVILNGVDEN GFTSDKKLRT LFRSKLGLPE NSSAIVLGAA GRLVKDKGHP LLFEAFAKII QTYSNVYLVV AGSGPWEQRY KELGEKVSIL GSLNPNELKG 401: FYNGIDLFVN PTLRPQGLDL TLMEAMLSGK PVMASRYASI KRTIVVNDEF GFMFAPNVEA LTAVMEVAVA EGAERLAERG RKCKEYAAEM FTASKMALAY 501: ERLFLCINDQ KFCIYP |
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| See Also |
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Citation
If you find this resource useful please cite one of the following publications:
Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)
Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)