AT5G57100.1::SUBA5

AT5G57100.1

Subcellular Consensus
(Prediction and Experimental)

min:

:max

SUBAcon:
plasma membrane 0.952
What is SUBAcon?

Predictors

External Curations

no data

Experimental Localisations and PPI

FP	MS/MS	PPI
		PMID:24833385 (2014): AT2G41705.1:None: PMID:24833385 (2014): AT3G12180.1:None: PMID:24833385 (2014): AT3G10640.1:None: PMID:24833385 (2014): AT2G26180.1:None: PMID:24833385 (2014): AT3G66654.1:None: PMID:24833385 (2014): AT1G14700.1:None: PMID:24833385 (2014): AT5G49540.1:None: PMID:24833385 (2014): AT1G21240.1:None: PMID:24833385 (2014): AT5G59650.1:None: PMID:24833385 (2014): AT1G29060.1:None: PMID:24833385 (2014): AT4G30850.1:None: PMID:24833385 (2014): AT3G17000.1:None: PMID:24833385 (2014): AT1G17280.1:None: PMID:24833385 (2014): AT5G06320.1:None:

SUBAcon links
AGI-AGI relationships

Coexpression	PPI
AT5G56590.1 plasma membrane [4.71] AT5G65470.1 plasma membrane [4.63] AT5G12900.1 nucleus [4.37] AT3G57930.1 nucleus [4.19] AT4G09640.1 plasma membrane [4.07] AT1G18670.1 plasma membrane [4.05] AT3G25710.1 nucleus [4.03] AT5G66460.1 extracellular [4.01] AT2G25790.1 plasma membrane [4.01] AT4G35470.1 plasma membrane [4.01]	AT3G12180.1 endoplasmic reticulum AT3G17000.1 endoplasmic reticulum AT1G14700.1 extracellular AT1G17280.1 golgi AT1G29060.1 golgi AT3G66654.1 golgi AT4G30850.1 golgi AT2G26180.1 nucleus AT3G10640.1 nucleus AT1G21240.1 plasma membrane AT2G41705.1 plasma membrane AT5G06320.1 plasma membrane AT5G59650.1 plasma membrane AT5G49540.1 vacuole

Description (TAIR10)

protein_coding : Nucleotide/sugar transporter family protein

Curator
Summary (TAIR10)

Computational
Description (TAIR10)

Nucleotide/sugar transporter family protein; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF250 (InterPro:IPR004853); BEST Arabidopsis thaliana protein match is: Nucleotide/sugar transporter family protein (TAIR:AT5G55950.1); Has 2192 Blast hits to 2189 proteins in 223 species: Archae - 0; Bacteria - 8; Metazoa - 527; Fungi - 398; Plants - 1015; Viruses - 0; Other Eukaryotes - 244 (source: NCBI BLink).

Protein Annotations

eggNOG:ENOG410XP1S	eggNOG:KOG1441	EMBL:AB023042	EMBL:CP002688
EnsemblPlants:AT5G57100	EnsemblPlants:AT5G57100.1	entrez:835814	GeneID:835814
GO:GO:0008643	GO:GO:0016021	Gramene:AT5G57100.1	hmmpanther:PTHR11132
hmmpanther:PTHR11132:SF75	InterPro:IPR004853	KEGG:ath:AT5G57100	OMA:PSIVFAE
Pfam:PF03151	PhylomeDB:Q9LU76	Proteomes:UP000006548	RefSeq:NP_200520.1
STRING:3702.AT5G57100.1	TAIR:AT5G57100	TMHMM:TMhelix	UniGene:At.9675
UniProt:Q9LU76

Coordinates (TAIR10)

chr5:-:23106563..23108440

Molecular Weight (calculated)

43152.00 Da

IEP (calculated)

10.34

GRAVY (calculated)

0.38

Length

390 amino acids

Sequence (TAIR10)
(BLAST)

001: MLLTPKMFSS WLRQDVKKIL KRKDSDAGER GKALEDLRAS LFNRFRSPET PKRQQQQQHR ICGPTVALTF NFVVAISIIF MNKWVLKNIG FEFPVFLTFI
101: HYIVAYLLMA LLKSFSLLPA SPPSTKSSLL PLYTLGIVMS LSTGLANVSL KYNSVGFYQM AKIAVTPSIV FAEFLWYRKR VSFMKVVSLT VVSVGVAVAT
201: VTDLQFSLFG ACVAFAWIIP SATNKILWSN MQQRENWTAL ALMWKTTPIT LLFLVSMIPF LDPPGALSFN WSLTNTSAIL VSALLGFFLQ WSGALALGAT
301: SAITHVVLGQ FKTCVLLLGN YYIFGSNSGF ISVGGAFVAI MGTSLYTYLN TRGQSLKTSS SSSALSEKKS RFSDLKDDDK NLEPYGSEAV