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AT5G55510.1
Subcellular Consensus
(Prediction and Experimental)
min: heatmap :max

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SUBAcon:
plastid 1.000
ASURE: plastid
What is SUBAcon?
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no PPI data
Description (TAIR10) protein_coding : Mitochondrial import inner membrane translocase subunit Tim17/Tim22/Tim23 family protein
Curator
Summary (TAIR10)
Computational
Description (TAIR10)
Mitochondrial import inner membrane translocase subunit Tim17/Tim22/Tim23 family protein; FUNCTIONS IN: protein transporter activity, P-P-bond-hydrolysis-driven protein transmembrane transporter activity; INVOLVED IN: protein transport; LOCATED IN: mitochondrial inner membrane presequence translocase complex, chloroplast envelope; CONTAINS InterPro DOMAIN/s: Mitochondrial inner membrane translocase complex, subunit Tim17/22 (InterPro:IPR003397); BEST Arabidopsis thaliana protein match is: Mitochondrial import inner membrane translocase subunit Tim17/Tim22/Tim23 family protein (TAIR:AT4G26670.1); Has 535 Blast hits to 535 proteins in 144 species: Archae - 0; Bacteria - 0; Metazoa - 181; Fungi - 197; Plants - 120; Viruses - 0; Other Eukaryotes - 37 (source: NCBI BLink).
Protein Annotations
DNASU:835645eggNOG:COG5596eggNOG:KOG1652EMBL:AB015479
EMBL:AK227469EMBL:BT012594EMBL:BT015156EMBL:CP002688
EMBL:DQ405271EnsemblPlants:AT5G55510EnsemblPlants:AT5G55510.1entrez:835645
GeneID:835645GO:GO:0005743GO:GO:0009941GO:GO:0015266
GO:GO:0016021GO:GO:0033365GO:GO:0071806Gramene:AT5G55510.1
hmmpanther:PTHR14110hmmpanther:PTHR14110:SF1HOGENOM:HOG000239820InParanoid:Q6NKU9
InterPro:IPR003397KEGG:ath:AT5G55510OMA:NHEANDVPaxDb:Q6NKU9
Pfam:PF02466Pfam:Q6NKU9PhylomeDB:Q6NKU9PRIDE:Q6NKU9
PRO:PR:Q6NKU9Proteomes:UP000006548RefSeq:NP_200362.3STRING:3702.AT5G55510.1
TAIR:AT5G55510UniGene:At.29437UniProt:Q6NKU9
Coordinates (TAIR10) chr5:-:22486525..22487916
Molecular Weight (calculated) 22525.00 Da
IEP (calculated) 9.12
GRAVY (calculated) 0.04
Length 214 amino acids
Sequence (TAIR10)
(BLAST)
001: MAAENSSNAI NVDTSLDSDS KPNRDANDMT DHDSSSKALV IPAPAVCLVR FAGDAASGAF MGSVFGYGSG LFKKKGFKGS FVDAGQSAKT FAVLSGVHSL
101: VVCLLKQIRG KDDAINVGVA GCCTGLALSF PGAPQAMLQS CLTFGAFSFI LEGLNKRQTA LAHSVSFRQQ TRSPQHDLPL LSLAIPIHDE IKGAFSSFCN
201: SLTKPKKLKF PHAR
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)