AT5G53870.1
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Subcellular Consensus
(Prediction and Experimental) min:  :max.
SUBAcon:extracellular 1.000 What is SUBAcon? |
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| Experimental Localisations and PPI |
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SUBAcon links
AGI-AGI relationships |
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| Description (TAIR10) | protein_coding : early nodulin-like protein 1 | ||||||||||||||||||||||||||||||||||||||||
| Curator Summary (TAIR10) |
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| Computational Description (TAIR10) |
early nodulin-like protein 1 (ENODL1); FUNCTIONS IN: electron carrier activity, copper ion binding; LOCATED IN: plasma membrane, anchored to membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 9 growth stages; CONTAINS InterPro DOMAIN/s: Plastocyanin-like (InterPro:IPR003245), Cupredoxin (InterPro:IPR008972); BEST Arabidopsis thaliana protein match is: early nodulin-like protein 2 (TAIR:AT4G27520.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). | ||||||||||||||||||||||||||||||||||||||||
| Protein Annotations |
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| Coordinates (TAIR10) | chr5:-:21870033..21871228 | ||||||||||||||||||||||||||||||||||||||||
| Molecular Weight (calculated) | 38397.10 Da | ||||||||||||||||||||||||||||||||||||||||
| IEP (calculated) | 9.51 | ||||||||||||||||||||||||||||||||||||||||
| GRAVY (calculated) | -0.49 | ||||||||||||||||||||||||||||||||||||||||
| Length | 370 amino acids | ||||||||||||||||||||||||||||||||||||||||
| Sequence (TAIR10) (BLAST) |
001: MSAIMKSLCF SFLILASFAT FFSVADAWRF NVGGNGAWVT NPQENYNTWA ERNRFQVNDS LYFKYAKGSD SVQQVMKADF DGCNVRNPIK NFENGESVVT 101: LDRSGAFYFI SGNQDHCQKG QKLIVVVLAV RNQPSAPAHS PVPSVSPTQP PKSHSPVSPV APASAPSKSQ PPRSSVSPAQ PPKSSSPISH TPALSPSHAT 201: SHSPATPSPS PKSPSPVSHS PSHSPAHTPS HSPAHTPSHS PAHAPSHSPA HAPSHSPAHA PSHSPAHSPS HSPATPKSPS PSSSPAQSPA TPSPMTPQSP 301: SPVSSPSPDQ SAAPSDQSTP LAPSPSETTP TADNITAPAP SPRTNSASGL AVTSVMSTLF SATFTFLMFA |
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| See Also |
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Citation
If you find this resource useful please cite one of the following publications:
Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)
Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)