AT3G20100.1
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Subcellular Consensus
(Prediction and Experimental) min:  :max.
SUBAcon:plasma membrane 0.567 What is SUBAcon? |
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| Experimental Localisations and PPI |
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SUBAcon links
AGI-AGI relationships |
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| Description (TAIR10) | protein_coding : cytochrome P450, family 705, subfamily A, polypeptide 19 | ||||||||||||||||||||||||||||||||||||||||
| Curator Summary (TAIR10) |
member of CYP705A | ||||||||||||||||||||||||||||||||||||||||
| Computational Description (TAIR10) |
cytochrome P450, family 705, subfamily A, polypeptide 19 (CYP705A19); FUNCTIONS IN: electron carrier activity, monooxygenase activity, iron ion binding, oxygen binding, heme binding; INVOLVED IN: oxidation reduction; LOCATED IN: endomembrane system; EXPRESSED IN: 18 plant structures; EXPRESSED DURING: 9 growth stages; CONTAINS InterPro DOMAIN/s: Cytochrome P450 (InterPro:IPR001128), Cytochrome P450, E-class, group I (InterPro:IPR002401), Cytochrome P450, conserved site (InterPro:IPR017972); BEST Arabidopsis thaliana protein match is: cytochrome P450, family 705, subfamily A, polypeptide 32 (TAIR:AT3G20950.1); Has 32760 Blast hits to 32520 proteins in 1638 species: Archae - 50; Bacteria - 3650; Metazoa - 11393; Fungi - 7084; Plants - 9331; Viruses - 6; Other Eukaryotes - 1246 (source: NCBI BLink). | ||||||||||||||||||||||||||||||||||||||||
| Protein Annotations |
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| Coordinates (TAIR10) | chr3:+:7019014..7020649 | ||||||||||||||||||||||||||||||||||||||||
| Molecular Weight (calculated) | 58264.20 Da | ||||||||||||||||||||||||||||||||||||||||
| IEP (calculated) | 8.52 | ||||||||||||||||||||||||||||||||||||||||
| GRAVY (calculated) | -0.09 | ||||||||||||||||||||||||||||||||||||||||
| Length | 513 amino acids | ||||||||||||||||||||||||||||||||||||||||
| Sequence (TAIR10) (BLAST) |
001: MTTTEFQSCF IFLLLCLFSL VCYSLFFRKP SSRRDAHGCD LPPSPPSLPV IGHLHLILSS LVHKSFQKIS SNYGPLLHLR IFNVPIVLVS SASVAYDIFR 101: VHDLNVSSRG SPPFEESLLF GSTGFISAPY GDYFKFMKKH LVTKLLGPQA LERSRLIRTN ELERFYINLL DKATKKESVE IGKEAMKLSN NSICKMIMGR 201: SCLEEKGEAE RVRGLIIESF YLTKKFFLAF TLRGLLEKLG ISLFKKEIMG VSRRFDDLLE RYLREHEEKP DNEHQDTDMI DALLAAYRDE KAEYKITRNQ 301: IKAFLVDIFI AGTDISALTT QGTMAEIINN PNIFVRIREE IDSVVGKSRL IQETDLPKLP YLQAVVKEGL RLHPPTPLMV REFQEGCKVK GFYIPASTTL 401: VVNGYAVMRD PNVWEDPEEF KPERFLASSR LMQEDEIREQ ALKYIAFGSG RRGCPGANVA YIFVGTAIGM MVQCFDWRIN GEKVDMKEAI GGLNLTLAHP 501: LKCTPVARFP KPF |
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| See Also |
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Citation
If you find this resource useful please cite one of the following publications:
Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)
Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)