AT3G21250.1
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Subcellular Consensus
(Prediction and Experimental) min:  :max.
SUBAcon:vacuole 1.000 What is SUBAcon? |
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| Experimental Localisations and PPI |
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SUBAcon links
AGI-AGI relationships |
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| Description (TAIR10) | protein_coding : multidrug resistance-associated protein 6 | ||||||||||||||||
| Curator Summary (TAIR10) |
member of MRP subfamily | ||||||||||||||||
| Computational Description (TAIR10) |
multidrug resistance-associated protein 6 (MRP6); FUNCTIONS IN: ATPase activity, coupled to transmembrane movement of substances; INVOLVED IN: response to cyclopentenone; LOCATED IN: vacuolar membrane, plasma membrane, plant-type vacuole; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: ATPase, AAA+ type, core (InterPro:IPR003593), ABC transporter-like (InterPro:IPR003439), ABC transporter integral membrane type 1 (InterPro:IPR017940), ABC transporter, transmembrane domain, type 1 (InterPro:IPR011527), ABC transporter, transmembrane domain (InterPro:IPR001140), ABC transporter, conserved site (InterPro:IPR017871); BEST Arabidopsis thaliana protein match is: multidrug resistance-associated protein 14 (TAIR:AT3G59140.1); Has 598023 Blast hits to 338310 proteins in 3899 species: Archae - 10844; Bacteria - 482752; Metazoa - 12132; Fungi - 7443; Plants - 6523; Viruses - 16; Other Eukaryotes - 78313 (source: NCBI BLink). | ||||||||||||||||
| Protein Annotations |
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| Coordinates (TAIR10) | chr3:-:7457668..7463261 | ||||||||||||||||
| Molecular Weight (calculated) | 160808.00 Da | ||||||||||||||||
| IEP (calculated) | 7.80 | ||||||||||||||||
| GRAVY (calculated) | 0.30 | ||||||||||||||||
| Length | 1453 amino acids | ||||||||||||||||
| Sequence (TAIR10) (BLAST) |
0001: MAAFIGSLPW CDVELNLASS CFQRTAIAFV NLLFLCIFYL FLIASCVSTH FIVRGRKKGW IFVAVAICCA ITSFIFLGVG LNSLIHGGND VTEISWVACF 0101: VEGIIWVSLA VSLLVNGSKW VNILVSVWWV SFALLDLVAK SGILLQGNGI RILDILTLPM SLLLLLCSWM NLRSSSAAAQ DCSVTGLSDP LLTKNPRKES 0201: ARLATAGFFS ILSFSWMNPL LSLGFKKPLS PEDIPSVVPE DEAQLAYKKF SQAWDTLLGD ESSTKERNLV FRAVVKVYFK ENIFIAVFAF LRTFAVVSLP 0301: LMLYVFVDYA NSDHRDLRNG FFNLACLVML KLVESLTMRH WYFASRRSGM RIRSALMVAA YKKQLKLSSL GRKRHSSGEI VNYIAVDAYR MGEFLWWFHS 0401: GWSLSLQLLL STAVLFGVVG AGAFPGLILL LLCGLLNLPF AKMLQNCQTQ FMIAQDKRLR STSEILNSMK VIKLQSWEDE FKKKIESCRD DEFTWLAKAQ 0501: LTKAFGSFLY WMSPTIVSSV VFLGCALLKS APLNASTIFT VLATLRVMSE PVKIIPDAIS AIIQGNVSFQ RLNNFLLDDE LKMDEIERSG LDASGTAVDI 0601: QVGNFGWEPE TKIPTLRNIH LEIKHGQKVA VCGPVGAGKS SLLHAVLGEI PKVSGTVKVF GSIAYVSQTS WIQSGTIRDN ILYGKPMESR RYNAAIKACA 0701: LDKDMNGFGH GDLTEIGQRG INLSGGQKQR IQLARAVYAD ADVYLLDDPF SAVDAHTAGV LFHKCVEDSL KEKTVILVTH QVMEEGTITQ SGKYEELLMM 0801: GTAFQQLVNA HNDAVTVLPL ASNESLGDLR KEGKDREIRN MTVVEKIEEE IEKTDIPGVQ LTQEEEKESG YVGMKPFLDY IGVSRGWCLL WSSVLGQVGF 0901: VVFQAASTYW LAFAIGIPKI TNTMLIGVYS IISTLSAGFV YARAITTAHL GLKASKAFFS GFTNAVFKAP MLFFDSTPVG RILTRASSDL NVLDYDVPFA 1001: FIFVVAPAVE LTAALLIMTY VTWQVIIIAL LALAATKVVQ DYYLASAREL IRINGTTKAP VMNYAAETSL GVVTIRAFGT AERFFKNYLN LVDADAVLFF 1101: LSNAAMEWVI LRIETLQNVT LFTCALLLIL IPKGYIAPGL VGLSLSYALT LTQTQVFLTR WYCTLSNSII SVERIKQYMN IPEEPPAIID DKRPPSSWPS 1201: NGTIHLQELK IRYRPNAPLV LKGISCTFRE GTRVGVVGRT GSGKSTLISA LFRLVEPASG CILIDGIDIS KIGLKDLRMK LSIIPQEPTL FRGCIRTNLD 1301: PLGVYSDDEI WKALEKCQLK TTISNLPNKL DSSVSDEGEN WSVGQRQLFC LGRVLLKRNK ILVLDEATAS IDSATDAIIQ RIIREEFADC TVITVAHRVP 1401: TVIDSDMVMV LSFGDLVEYN EPSKLMETDS YFSKLVAEYW ASCRGNSSQN LQL |
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| See Also |
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Citation
If you find this resource useful please cite one of the following publications:
Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)
Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)