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AT3G21260.1
Subcellular Consensus
(Prediction and Experimental)
min: heatmap :max

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SUBAcon:
nucleus 0.728
What is SUBAcon?
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no PPI data
Description (TAIR10) protein_coding : Glycolipid transfer protein (GLTP) family protein
Curator
Summary (TAIR10)
Computational
Description (TAIR10)
GLYCOLIPID TRANSFER PROTEIN 3 (GLTP3); FUNCTIONS IN: glycolipid transporter activity, glycolipid binding; INVOLVED IN: glycolipid transport; LOCATED IN: cytoplasm; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Glycolipid transfer protein, GLTP (InterPro:IPR014830); BEST Arabidopsis thaliana protein match is: glycolipid transfer protein 2 (TAIR:AT1G21360.1); Has 413 Blast hits to 413 proteins in 125 species: Archae - 0; Bacteria - 0; Metazoa - 180; Fungi - 95; Plants - 108; Viruses - 0; Other Eukaryotes - 30 (source: NCBI BLink).
Protein Annotations
eggNOG:ENOG410YFEAeggNOG:KOG3221EMBL:AB023045EMBL:AK228318
EMBL:AY086592EMBL:BT029314EMBL:CP002686EnsemblPlants:AT3G21260
EnsemblPlants:AT3G21260.1EnsemblPlants:AT3G21260.2EnsemblPlants:AT3G21260.3entrez:821680
ExpressionAtlas:Q9LU33Gene3D:1.10.3520.10GeneID:821680Genevisible:Q9LU33
GO:GO:0005737GO:GO:0017089GO:GO:0051861hmmpanther:PTHR10219
hmmpanther:PTHR10219:SF34HOGENOM:HOG000199421InterPro:IPR014830KEGG:ath:AT3G21260
ncoils:CoilOMA:LTIKPWHPaxDb:Q9LU33Pfam:PF08718
PhylomeDB:Q9LU33PRO:PR:Q9LU33ProteinModelPortal:Q9LU33Proteomes:UP000006548
Reactome:R-ATH-1660662RefSeq:NP_001154632.1RefSeq:NP_566679.1RefSeq:NP_850619.1
SMR:Q9LU33SUPFAM:0043785SUPFAM:SSF110004TAIR:AT3G21260
tair10-symbols:GLTP3UniGene:At.38091UniProt:A0JPU4
Coordinates (TAIR10) chr3:-:7464132..7464848
Molecular Weight (calculated) 16401.00 Da
IEP (calculated) 7.51
GRAVY (calculated) -0.07
Length 144 amino acids
Sequence (TAIR10)
(BLAST)
001: MWESDPLVYS NLVEILRKEA KEGSSRKPKS CSRAALWLTR AMDFTLALLQ RLVKDMSQNM EQAIEECYNL TIKPWHGWIS SAAFKVALKL VPNNNTFINV
101: LAAKDETHQM VQDDITSLIS LLIPLLSQLH SILELYEVSK LKSP
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)