AT3G21260.1
Subcellular Consensus
(Prediction and Experimental) min: :max .
SUBAcon:nucleus 0.728 What is SUBAcon? |
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Experimental Localisations and PPI |
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SUBAcon links
AGI-AGI relationships |
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Description (TAIR10) | protein_coding : Glycolipid transfer protein (GLTP) family protein | ||||||||||||||||||||||||||||||||||||||||||||
Curator Summary (TAIR10) |
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Computational Description (TAIR10) |
GLYCOLIPID TRANSFER PROTEIN 3 (GLTP3); FUNCTIONS IN: glycolipid transporter activity, glycolipid binding; INVOLVED IN: glycolipid transport; LOCATED IN: cytoplasm; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Glycolipid transfer protein, GLTP (InterPro:IPR014830); BEST Arabidopsis thaliana protein match is: glycolipid transfer protein 2 (TAIR:AT1G21360.1); Has 413 Blast hits to 413 proteins in 125 species: Archae - 0; Bacteria - 0; Metazoa - 180; Fungi - 95; Plants - 108; Viruses - 0; Other Eukaryotes - 30 (source: NCBI BLink). | ||||||||||||||||||||||||||||||||||||||||||||
Protein Annotations |
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Coordinates (TAIR10) | chr3:-:7464132..7464848 | ||||||||||||||||||||||||||||||||||||||||||||
Molecular Weight (calculated) | 16401.00 Da | ||||||||||||||||||||||||||||||||||||||||||||
IEP (calculated) | 7.51 | ||||||||||||||||||||||||||||||||||||||||||||
GRAVY (calculated) | -0.07 | ||||||||||||||||||||||||||||||||||||||||||||
Length | 144 amino acids | ||||||||||||||||||||||||||||||||||||||||||||
Sequence (TAIR10) (BLAST) |
001: MWESDPLVYS NLVEILRKEA KEGSSRKPKS CSRAALWLTR AMDFTLALLQ RLVKDMSQNM EQAIEECYNL TIKPWHGWIS SAAFKVALKL VPNNNTFINV 101: LAAKDETHQM VQDDITSLIS LLIPLLSQLH SILELYEVSK LKSP |
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See Also |
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Citation
If you find this resource useful please cite one of the following publications:
Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)
Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)