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AT3G29035.1
Subcellular Consensus
(Prediction and Experimental)
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SUBAcon:
nucleus 1.000
ASURE: nucleus
What is SUBAcon?
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
Description (TAIR10) protein_coding : NAC domain containing protein 3
Curator
Summary (TAIR10)
Encodes a protein with transcription factor activity. Note: this protein (AT3G29035) on occasion has also been referred to as AtNAC3, not to be confused with the AtNAC3 found at locus AT3G15500.
Computational
Description (TAIR10)
NAC domain containing protein 3 (NAC3); CONTAINS InterPro DOMAIN/s: No apical meristem (NAM) protein (InterPro:IPR003441); BEST Arabidopsis thaliana protein match is: NAC domain containing protein 6 (TAIR:AT5G39610.1); Has 2988 Blast hits to 2981 proteins in 79 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 2988; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
Protein Annotations
DNASU:822547eggNOG:ENOG410JSRMeggNOG:ENOG41108JEEMBL:AB025615
EMBL:AP000388EMBL:AY062638EMBL:BT008716EMBL:CP002686
EnsemblPlants:AT3G29035EnsemblPlants:AT3G29035.1entrez:822547GeneID:822547
Genevisible:Q9LJW3GO:GO:0003700GO:GO:0005634GO:GO:0006351
GO:GO:0009611GO:GO:0010150GO:GO:0042542GO:GO:0043565
GO:GO:0051091GO:GO:1900057Gramene:AT3G29035.1hmmpanther:PTHR31744
hmmpanther:PTHR31744:SF7HOGENOM:HOG000237406InParanoid:Q9LJW3IntAct:Q9LJW3
InterPro:IPR003441KEGG:ath:AT3G29035OMA:ITHYLRPPaxDb:Q9LJW3
Pfam:PF02365Pfscan:PS51005PhylomeDB:Q9LJW3PRIDE:Q9LJW3
PRO:PR:Q9LJW3PROSITE:PS51005ProteinModelPortal:Q9LJW3Proteomes:UP000006548
RefSeq:NP_189546.1SMR:Q9LJW3STRING:3702.AT3G29035.1SUPFAM:SSF101941
TAIR:AT3G29035tair10-symbols:ANAC059tair10-symbols:ATNAC3tair10-symbols:NAC3
UniGene:At.27282UniProt:Q9LJW3
Coordinates (TAIR10) chr3:+:11033839..11035006
Molecular Weight (calculated) 35827.40 Da
IEP (calculated) 8.42
GRAVY (calculated) -0.52
Length 318 amino acids
Sequence (TAIR10)
(BLAST)
001: MDYKVSRSGE IVEGEVEDSE KIDLPPGFRF HPTDEELITH YLRPKVVNSF FSAIAIGEVD LNKVEPWDLP WKAKLGEKEW YFFCVRDRKY PTGLRTNRAT
101: KAGYWKATGK DKEIFKGKSL VGMKKTLVFY KGRAPKGVKT NWVMHEYRLE GKFAIDNLSK TAKNECVISR VFHTRTDGTK EHMSVGLPPL MDSSPYLKSR
201: GQDSLAGTTL GGLLSHVTYF SDQTTDDKSL VADFKTTMFG SGSTNFLPNI GSLLDFDPLF LQNNSSVLKM LLDNEETQFK KNLHNSGSSE SELTASSWQG
301: HNSYGSTGPV NLDCVWKF
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)