AT3G22460.1
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Subcellular Consensus
(Prediction and Experimental) min:  :max.
SUBAcon:cytosol 0.998 What is SUBAcon? |
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| Experimental Localisations and PPI |
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SUBAcon links
AGI-AGI relationships |
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| Description (TAIR10) | protein_coding : O-acetylserine (thiol) lyase (OAS-TL) isoform A2 | ||||||||||||||||||||||||||||||||||||||||||||||||
| Curator Summary (TAIR10) |
Encodes a member of a family of genes with O-acetylserine(thiol)lyase activity. | ||||||||||||||||||||||||||||||||||||||||||||||||
| Computational Description (TAIR10) |
O-acetylserine (thiol) lyase (OAS-TL) isoform A2 (OASA2); FUNCTIONS IN: pyridoxal phosphate binding, cysteine synthase activity, catalytic activity; INVOLVED IN: response to zinc ion, cysteine biosynthetic process; EXPRESSED IN: 19 plant structures; EXPRESSED DURING: 9 growth stages; CONTAINS InterPro DOMAIN/s: Cysteine synthase/cystathionine beta-synthase P-phosphate-binding site (InterPro:IPR001216), Cysteine synthase A (InterPro:IPR005859), Pyridoxal phosphate-dependent enzyme, beta subunit (InterPro:IPR001926), Cysteine synthase K/M (InterPro:IPR005856); BEST Arabidopsis thaliana protein match is: O-acetylserine (thiol) lyase (OAS-TL) isoform A1 (TAIR:AT4G14880.4); Has 14730 Blast hits to 14718 proteins in 2599 species: Archae - 275; Bacteria - 10234; Metazoa - 248; Fungi - 427; Plants - 495; Viruses - 2; Other Eukaryotes - 3049 (source: NCBI BLink). | ||||||||||||||||||||||||||||||||||||||||||||||||
| Protein Annotations |
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| Coordinates (TAIR10) | chr3:+:7963855..7965751 | ||||||||||||||||||||||||||||||||||||||||||||||||
| Molecular Weight (calculated) | 32340.50 Da | ||||||||||||||||||||||||||||||||||||||||||||||||
| IEP (calculated) | 5.86 | ||||||||||||||||||||||||||||||||||||||||||||||||
| GRAVY (calculated) | 0.07 | ||||||||||||||||||||||||||||||||||||||||||||||||
| Length | 305 amino acids | ||||||||||||||||||||||||||||||||||||||||||||||||
| Sequence (TAIR10) (BLAST) |
001: MASVAPKIAK DVTELIGNTP LVYLNKVAKD CVGHVAAKLE MMEPCSSVKD RIGYSMIADA EAKGLIKPGE SVLIEPTSGN TGVGLAFTAA AKGYKLVITM 101: PASMSIERRI ILLAFGAELI LTDPAKGMKG AVAKAEEILA KTPNGYMLQQ FENPANPKIH YETTGPEIWK GAGKYLKEQN TNIKLYGVEP VESPILSGGK 201: PGPHKIQGIG AGFIPGILDV DLIDEVVQVS SEESIDMARL LAREEGLLVG ISSGAAATAA IKLAKRPENA GKLIVAVFPS FGERYLSTVL FDAARKEAET 301: MTFEP |
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| See Also |
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Citation
If you find this resource useful please cite one of the following publications:
Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)
Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)