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AT5G18640.1
Subcellular Consensus
(Prediction and Experimental)
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SUBAcon:
extracellular 1.000
What is SUBAcon?
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no PPI data
Description (TAIR10) protein_coding : alpha/beta-Hydrolases superfamily protein
Curator
Summary (TAIR10)
Computational
Description (TAIR10)
alpha/beta-Hydrolases superfamily protein; FUNCTIONS IN: triglyceride lipase activity; INVOLVED IN: lipid metabolic process; LOCATED IN: endomembrane system; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Lipase, class 3 (InterPro:IPR002921); BEST Arabidopsis thaliana protein match is: alpha/beta-Hydrolases superfamily protein (TAIR:AT5G18630.2); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).
Protein Annotations
eggNOG:ENOG410IQ3AeggNOG:ENOG4111VS9EMBL:CP002688EnsemblPlants:AT5G18640
EnsemblPlants:AT5G18640.1entrez:831982Gene3D:3.40.50.1820GeneID:831982
GO:GO:0006629GO:GO:0016787Gramene:AT5G18640.1gramene_pathway:3.1.1.3
gramene_pathway:LIPAS-PWYhmmpanther:PTHR21493hmmpanther:PTHR21493:SF101InParanoid:F4JY30
InterPro:IPR002921InterPro:IPR029058KEGG:ath:AT5G18640OMA:GELRMKH
PaxDb:F4JY30Pfam:PF01764Pfscan:PS51257PRIDE:F4JY30
ProteinModelPortal:F4JY30Proteomes:UP000006548RefSeq:NP_197365.2SMR:F4JY30
STRING:3702.AT5G18640.1SUPFAM:SSF53474TAIR:AT5G18640UniGene:At.54904
UniProt:F4JY30
Coordinates (TAIR10) chr5:+:6213283..6215494
Molecular Weight (calculated) 40236.30 Da
IEP (calculated) 6.50
GRAVY (calculated) -0.03
Length 357 amino acids
Sequence (TAIR10)
(BLAST)
001: MGQKRWFFLL AIFVCLVSSS CGRVLKFKSD DGRPVYNHTL AITLVEYTSA VYMSDLSELF TWTCERCNGL TKGFEVIEII VDVEHCLQAY VGVAKDLNAI
101: IIAFRGTQEH SIQNWVSDLF WKQLDLNYPD MPDAMVHHGF YSAYHNTTVR PAVLDAVKRA KESYGANLNI MVTGHSMGGA MASFCALDLV VNEGEENVQV
201: MTFGQPRVGN AAFASYFNLL VPNTFRIIHD RDIVPHLPPY YHLFPQKTYH HFPTEVWLTE LSILNIVIRG VEKVCDNTGE DPTCSRSVMG NSISDHLTYF
301: GVELMGETWR QCNIVMGHEM ESYSRKDSKG NIFLSRTVPS TEVIKTKSIS KTGISSL
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)